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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255506   protein CHLOROPLAST IMPORT APPARATUS 2 
 sly-r.6   101255506   protein CHLOROPLAST IMPORT APPARATUS 2 
 ath-u.5   CIL   CCT motif family protein 
 ath-u.5   CIA2   chloroplast import apparatus 2 
 gma-u.5   102670319   protein CHLOROPLAST IMPORT APPARATUS 2 
 gma-u.5   100810303   protein CHLOROPLAST IMPORT APPARATUS 2 
 gma-u.5   100784788   protein CHLOROPLAST IMPORT APPARATUS 2 
 vvi-u.5   100265819   protein CHLOROPLAST IMPORT APPARATUS 2 
 ppo-u.5   7484067   protein CHLOROPLAST IMPORT APPARATUS 2 
 ppo-u.5   7485501   protein CHLOROPLAST IMPORT APPARATUS 2 
 mtr-u.5   11441754   protein CHLOROPLAST IMPORT APPARATUS 2 
 mtr-u.5   11443621   protein CHLOROPLAST IMPORT APPARATUS 2 
 osa-u.5   4328296   protein CHLOROPLAST IMPORT APPARATUS 2 
 osa-u.5   4341958   protein CHLOROPLAST IMPORT APPARATUS 2 
 zma-u.5   103626617   protein CHLOROPLAST IMPORT APPARATUS 2 
 zma-u.5   100501277   uncharacterized LOC100501277 
 zma-u.5   100281423   uncharacterized LOC100281423 

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Top 50 coexpressed genes to 101255506 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255506 (sly-u.5 coexpression data)

CoexMap"101255506"


slyLOC101255506 | Entrez gene ID : 101255506      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 2 3 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004242804.2 [sequence] [blastp]
XP_010323337.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  golg_plas 1  (predict for XP_004242804.2)
nucl 7,  chlo 1,  cyto 1,  chlo_mito 1,  golg_plas 1  (predict for XP_010323337.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_004242804.2)
chlo 7  (predict for XP_010323337.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255506

.
sly-r.6
for
101255506

.
ath-u.5
for
CIL

.
ath-u.5
for
CIA2

.
gma-u.5
for
102670319

.
gma-u.5
for
100810303

.
gma-u.5
for
100784788

.
vvi-u.5
for
100265819

.
ppo-u.5
for
7484067

.
ppo-u.5
for
7485501

.
mtr-u.5
for
11441754

.
mtr-u.5
for
11443621

.
osa-u.5
for
4328296

.
osa-u.5
for
4341958

.
zma-u.5
for
103626617

.
zma-u.5
for
100501277

.
zma-u.5
for
100281423

.


Ortholog ID: 3606
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna sbi sbi sot cit bdi bdi nta nta
Symbol CIL CIA2 LOC100783619 LOC100810303 LOC101255506 LOC4328296 LOC4341958 LOC100501277 LOC100281423 LOC103845156 LOC103861597 LOC100265819 LOC7485501 LOC7484067 LOC11441754 LOC11443621 LOC123136294 LOC123132249 LOC123404396 LOC123407768 LOC107907368 LOC107907514 LOC106377535 LOC8065562 LOC8074627 LOC102605364 LOC102606754 LOC100822550 LOC100822180 LOC107760140 LOC107760235
Function* CCT motif family protein chloroplast import apparatus 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 uncharacterized LOC100501277 uncharacterized LOC100281423 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2-like protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2-like protein CHLOROPLAST IMPORT APPARATUS 2-like protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2 protein CHLOROPLAST IMPORT APPARATUS 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
osa00195 Photosynthesis 2
osa00860 Porphyrin metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 12
sbi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03018 RNA degradation 2
nta00195 Photosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00543 Exopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03018 RNA degradation 2
nta00195 Photosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00543 Exopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828705 835824 100783619 100810303 101255506 4328296 4341958 100501277 100281423 103845156 103861597 100265819 7485501 7484067 11441754 11443621 123136294 123132249 123404396 123407768 107907368 107907514 106377535 8065562 8074627 102605364 102606754 100822550 100822180 107760140 107760235
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