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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101255714  F-box/LRR-repeat protein At4g14103 
 sly-r.6  101255714  F-box/LRR-repeat protein At4g14103 
 sly-u.5  101252019  FBD-associated F-box protein At2g26860 
 sly-u.5  101247567  F-box/FBD/LRR-repeat protein At3g26920-like 
 sot-r.1  102578197  F-box protein At4g22280-like 
 sot-r.1  102587149  F-box/FBD/LRR-repeat protein At3g52680-like 
 sot-r.1  102589013  F-box/FBD/LRR-repeat protein At2g26030-like 
 nta-r.1  107812094  putative F-box/FBD/LRR-repeat protein At3g49480 
 nta-r.1  107812093  putative FBD-associated F-box protein At3g50710 
 bra-r.6  103830190  F-box protein At3g59000-like 
 bra-r.6  103841774  F-box/LRR-repeat protein At4g14096-like 
 vvi-u.5  104877721  F-box/LRR-repeat protein At3g59190 
 mtr-u.5  25492927  F-box/LRR-repeat protein At4g14103 
 ghi-r.1  107927417  F-box protein At4g09920 
 ghi-r.1  107919531  F-box/LRR-repeat protein At3g59210 
 bna-r.1  106353163  F-box/LRR-repeat protein At3g59190 

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Top 50 coexpressed genes to 101255714 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255714 (sly-u.5 coexpression data)

CoexMap"101255714"


slyLOC101255714 | Entrez gene ID : 101255714
Species sly sot nta bra vvi mtr ghi bna hvu bdi osa tae ppo zma cre sbi gma ath cit
Paralog 4 3 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004244145.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  cyto_mito 2,  chlo 2,  nucl 2  (predict for XP_004244145.2)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for XP_004244145.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101255714


sly-r.6
for
101255714


sly-u.5
for
101252019


sly-u.5
for
101247567


sot-r.1
for
102578197


sot-r.1
for
102587149


sot-r.1
for
102589013


nta-r.1
for
107812094


nta-r.1
for
107812093


bra-r.6
for
103830190


bra-r.6
for
103841774


vvi-u.5
for
104877721


mtr-u.5
for
25492927


ghi-r.1
for
107927417


ghi-r.1
for
107919531


bna-r.1
for
106353163



Ortholog ID: 145
Species sly sly sly sot sot nta ath ath bra vvi mtr ghi bna bna bna cit cit cit
Symbol LOC101255714 LOC101252019 LOC101247567 LOC102587149 LOC107060237 LOC107762245 AT3G59210 AT3G59200 LOC103857415 LOC104877721 LOC11412043 LOC107893518 LOC106387974 LOC106353160 LOC106353159 LOC102618124 LOC102618892 LOC102608914
Function* F-box/LRR-repeat protein At4g14103 FBD-associated F-box protein At2g26860 F-box/FBD/LRR-repeat protein At3g26920-like F-box/FBD/LRR-repeat protein At3g52680-like uncharacterized LOC107060237 F-box protein At4g22280 F-box/RNI-like superfamily protein F-box/RNI-like superfamily protein F-box/LRR-repeat protein At3g58930-like F-box/LRR-repeat protein At3g59190 F-box/LRR-repeat protein At3g58900 putative FBD-associated F-box protein At3g50710 F-box/LRR-repeat protein At3g58930-like F-box/LRR-repeat protein At3g59210-like F-box/LRR-repeat protein At3g59190 F-box/FBD/LRR-repeat protein At5g53840-like putative FBD-associated F-box protein At5g56440 F-box/LRR-repeat protein At3g58900-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101255714 101252019 101247567 102587149 107060237 107762245 825090 825089 103857415 104877721 11412043 107893518 106387974 106353160 106353159 102618124 102618892 102608914
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