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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101256243   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-r.6   101256243   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-m.5   101256243   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sot-r.1   102597747   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 nta-r.1   107812933   uncharacterized LOC107812933 
 nta-r.1   107813195   uncharacterized LOC107813195 
 ath-u.5   AT1G22630   SSUH2-like protein 
 gma-u.5   100305840   uncharacterized LOC100305840 
 bra-r.6   103835693   uncharacterized LOC103835693 
 ppo-u.5   18104411   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 mtr-u.5   25491766   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107903115   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107961217   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 bna-r.1   106434188   uncharacterized LOC106434188 
 bna-r.1   106425914   uncharacterized LOC106425914 
 osa-u.5   9266978   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 zma-u.5   100278105   uncharacterized LOC100278105 
 tae-r.2   123185369   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123179834   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123103334   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 hvu-r.1   123426688   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sbi-r.1   8066600   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 bdi-r.1   100834407   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 

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Top 50 coexpressed genes to 101256243 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101256243 (sly-u.5 coexpression data)

CoexMap"101256243"


slyLOC101256243 | Entrez gene ID : 101256243    
Species sly sot nta ath gma bra ppo mtr ghi bna osa zma tae hvu sbi bdi cre vvi cit
Paralog 3 1 2 1 1 1 1 1 2 2 1 1 3 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_004250427.1 [sequence] [blastp]
XP_010312873.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_004250427.1)
chlo 9,  extr 1  (predict for XP_010312873.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004250427.1)
chlo 9  (predict for XP_010312873.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101256243
sly-r.6
for
101256243
sly-m.5
for
101256243
sot-r.1
for
102597747
nta-r.1
for
107812933
nta-r.1
for
107813195
ath-u.5
for
AT1G22630
gma-u.5
for
100305840
bra-r.6
for
103835693
ppo-u.5
for
18104411
mtr-u.5
for
25491766
ghi-r.1
for
107903115
ghi-r.1
for
107961217
bna-r.1
for
106434188
bna-r.1
for
106425914
osa-u.5
for
9266978
zma-u.5
for
100278105
tae-r.2
for
123185369
tae-r.2
for
123179834
tae-r.2
for
123103334
hvu-r.1
for
123426688
sbi-r.1
for
8066600
bdi-r.1
for
100834407


Ortholog ID: 12026
Species sly sot nta nta ath gma bra ppo mtr ghi ghi bna bna osa zma tae tae tae hvu sbi bdi
Symbol LOC101256243 LOC102597747 LOC107812933 LOC107813195 AT1G22630 LOC100305840 LOC103835693 LOC18104411 LOC25491766 LOC107903115 LOC107961217 LOC106434188 LOC106425914 LOC9266978 LOC100278105 LOC123185369 LOC123179834 LOC123103334 LOC123426688 LOC8066600 LOC100834407
Function* protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic uncharacterized LOC107812933 uncharacterized LOC107813195 SSUH2-like protein uncharacterized LOC100305840 uncharacterized LOC103835693 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC106434188 uncharacterized LOC106425914 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC100278105 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00710 Carbon fixation by Calvin cycle 3
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00030 Pentose phosphate pathway 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot00195 Photosynthesis 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00710 Carbon fixation by Calvin cycle 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi00710 Carbon fixation by Calvin cycle 4
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00906 Carotenoid biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 12
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 6
tae01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 10
tae01200 Carbon metabolism 9
tae00710 Carbon fixation by Calvin cycle 6
tae00260 Glycine, serine and threonine metabolism 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 4
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101256243 102597747 107812933 107813195 838869 100305840 103835693 18104411 25491766 107903115 107961217 106434188 106425914 9266978 100278105 123185369 123179834 123103334 123426688 8066600 100834407
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