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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101256754  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 sly-r.6  101256754  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 ath-u.5  AT5G12100  pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5  100786292  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 gma-u.5  102660535  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 vvi-u.5  100854858  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 ppo-u.5  7469483  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 
 mtr-u.5  25499387  pentatricopeptide repeat-containing protein At5g12100, mitochondrial 

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Top 50 coexpressed genes to 101256754 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101256754 (sly-u.5 coexpression data)

CoexMap"101256754"


slyLOC101256754 | Entrez gene ID : 101256754
Species sly ath gma vvi ppo mtr sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004253145.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  mito_plas 1  (predict for XP_004253145.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_004253145.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101256754

.

sly-r.6
for
101256754

.

ath-u.5
for
AT5G12100

.

gma-u.5
for
100786292

.

gma-u.5
for
102660535

.

vvi-u.5
for
100854858

.

ppo-u.5
for
7469483

.

mtr-u.5
for
25499387

.


Ortholog ID: 12674
Species ath gma sly vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT5G12100 LOC100786292 LOC101256754 LOC100854858 LOC7469483 LOC25499387 LOC107905353 LOC121214029 LOC106424496 LOC106430900 LOC102596902 LOC102608453 LOC107771662 LOC107795287
Function* pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial-like pentatricopeptide repeat-containing protein At5g12100, mitochondrial pentatricopeptide repeat-containing protein At5g12100, mitochondrial uncharacterized LOC107771662 uncharacterized LOC107795287
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 4
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03250 Viral life cycle - HIV-1 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831083 100786292 101256754 100854858 7469483 25499387 107905353 121214029 106424496 106430900 102596902 102608453 107771662 107795287
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