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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101258202   coatomer subunit delta 
 sly-r.6   101258202   coatomer subunit delta 
 sly-u.5   101266270   coatomer subunit delta 
 ath-u.5   AT5G05010   clathrin adaptor complexes medium subunit family protein 
 gma-u.5   100778815   coatomer subunit delta 
 gma-u.5   100785260   coatomer subunit delta 
 gma-u.5   100806837   coatomer subunit delta 
 vvi-u.5   100247342   coatomer subunit delta-like 
 ppo-u.5   7481806   coatomer subunit delta 
 ppo-u.5   7482196   coatomer subunit delta 
 mtr-u.5   120577943   coatomer subunit delta 
 mtr-u.5   11420971   coatomer subunit delta-2 
 mtr-u.5   25485567   coatomer subunit delta 
 osa-u.5   9267932   coatomer subunit delta-4-like 
 osa-u.5   4338376   coatomer subunit delta-2-like 
 osa-u.5   4338375   coatomer subunit delta-1-like 
 zma-u.5   541810   delta-COP 
 zma-u.5   100283010   coatomer subunit delta 

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Top 50 coexpressed genes to 101258202 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258202 (sly-u.5 coexpression data)

CoexMap"101258202"


slyLOC101258202 | Entrez gene ID : 101258202    
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 3 1 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051645 [list] [network] Golgi localization  (2 genes)  IEA  
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (34 genes)  IEA  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (98 genes)  IEA  
GO CC
GO:0030126 [list] [network] COPI vesicle coat  (19 genes)  IEA  
GO MF
Protein XP_004248531.1 [sequence] [blastp]
XP_069146716.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_004248531.1)
chlo 6,  cyto 1,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_069146716.1)
Subcellular
localization
TargetP
other 1  (predict for XP_004248531.1)
other 1  (predict for XP_069146716.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101258202

.
sly-r.6
for
101258202

.
sly-u.5
for
101266270

.
ath-u.5
for
AT5G05010

.
gma-u.5
for
100778815

.
gma-u.5
for
100785260

.
gma-u.5
for
100806837

.
vvi-u.5
for
100247342

.
ppo-u.5
for
7481806

.
ppo-u.5
for
7482196

.
mtr-u.5
for
120577943

.
mtr-u.5
for
11420971

.
mtr-u.5
for
25485567

.
osa-u.5
for
9267932

.
osa-u.5
for
4338376

.
osa-u.5
for
4338375

.
zma-u.5
for
541810

.
zma-u.5
for
100283010

.


Ortholog ID: 3375
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT5G05010 LOC100778815 LOC100780122 LOC101266270 LOC101258202 LOC4338375 LOC4338376 LOC541810 LOC100283010 LOC103847233 LOC103850567 LOC100247342 LOC7482196 LOC7481806 LOC11420971 LOC120577943 LOC123054662 LOC123071304 LOC123442185 LOC123444974 LOC107945224 LOC107941949 LOC106419280 LOC106382988 CHLRE_02g089100v5 LOC8084799 LOC8073871 LOC102578688 LOC102588907 LOC102614683 LOC100843791 LOC100829686 LOC107767589 LOC107815743
Function* clathrin adaptor complexes medium subunit family protein coatomer subunit delta coatomer subunit delta coatomer subunit delta coatomer subunit delta coatomer subunit delta-1-like coatomer subunit delta-2-like delta-COP coatomer subunit delta coatomer subunit delta coatomer subunit delta coatomer subunit delta-like coatomer subunit delta coatomer subunit delta coatomer subunit delta-2 coatomer subunit delta coatomer subunit delta-1 coatomer subunit delta-3 coatomer subunit delta-1 coatomer subunit delta-3-like coatomer subunit delta coatomer subunit delta coatomer subunit delta coatomer subunit delta uncharacterized protein coatomer subunit delta-2 coatomer subunit delta-3 coatomer subunit delta-like coatomer subunit delta-like coatomer subunit delta coatomer subunit delta-1 coatomer subunit delta-3 coatomer subunit delta coatomer subunit delta
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath04382 Cornified envelope formation 3
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 3
gma01250 Biosynthesis of nucleotide sugars 3
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 6
sly01200 Carbon metabolism 6
sly01210 2-Oxocarboxylic acid metabolism 4
sly00785 Lipoic acid metabolism 3
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 6
bra00520 Amino sugar and nucleotide sugar metabolism 5
bra00541 Biosynthesis of various nucleotide sugars 4
bra00040 Pentose and glucuronate interconversions 3
bra00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 4
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra00541 Biosynthesis of various nucleotide sugars 3
bra04141 Protein processing in endoplasmic reticulum 2
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
mtr03050 Proteasome 2
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae04142 Lysosome 2
tae03060 Protein export 2
tae00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 5
tae04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi03060 Protein export 2
ghi04144 Endocytosis 2
ghi00190 Oxidative phosphorylation 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 3
ghi03060 Protein export 2
ghi00061 Fatty acid biosynthesis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi04144 Endocytosis 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04142 Lysosome 2
cit04144 Endocytosis 2
cit00541 Biosynthesis of various nucleotide sugars 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi05100 Bacterial invasion of epithelial cells 3
bdi04142 Lysosome 2
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 5
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830383 100778815 100780122 101266270 101258202 4338375 4338376 541810 100283010 103847233 103850567 100247342 7482196 7481806 11420971 120577943 123054662 123071304 123442185 123444974 107945224 107941949 106419280 106382988 5727448 8084799 8073871 102578688 102588907 102614683 100843791 100829686 107767589 107815743
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