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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101258296   F-box protein SKIP22 
 sly-r.6   101258296   F-box protein SKIP22 
 sot-r.1   102601599   F-box protein SKIP22-like 
 nta-r.1   107781711   F-box protein SKIP22 
 nta-r.1   107827515   F-box protein SKIP22-like 
 ath-u.5   AT1G23780   F-box family protein 
 ath-u.5   AT1G70360   F-box family protein 
 gma-u.5   100796338   F-box protein SKIP22 
 gma-u.5   100778313   F-box protein SKIP22 
 bra-r.6   103829259   F-box protein SKIP22 
 vvi-u.5   100246319   F-box protein SKIP22-like 
 ppo-u.5   18099149   F-box protein SKIP22 
 mtr-u.5   25491518   putative F-box protein At1g23770 
 mtr-u.5   25485313   F-box protein SKIP22 
 mtr-u.5   25498397   putative F-box protein At1g23770 
 ghi-r.1   121225698   F-box protein SKIP22 
 ghi-r.1   121214587   F-box protein SKIP22 
 ghi-r.1   107894200   F-box protein SKIP22 
 cit-r.1   102621422   putative F-box protein At1g23770 
 cit-r.1   102621712   F-box protein SKIP22-like 
 zma-u.5   100501928   uncharacterized LOC100501928 
 tae-r.2   123092893   F-box protein SKIP22 
 tae-r.2   123098172   F-box protein SKIP22 
 tae-r.2   123085102   F-box protein SKIP22 
 hvu-r.1   123449247   F-box protein SKIP22-like 
 sbi-r.1   8085253   F-box protein SKIP22 
 bdi-r.1   100841467   F-box protein SKIP22-like 
 cre-r.1   CHLRE_17g738800v5   uncharacterized protein 

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Top 50 coexpressed genes to 101258296 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258296 (sly-u.5 coexpression data)

CoexMap"101258296"


slyLOC101258296 | Entrez gene ID : 101258296    
Species sly sot nta ath gma bra vvi ppo mtr ghi cit zma tae hvu sbi bdi cre bna osa
Paralog 2 1 2 2 2 1 1 1 3 3 2 1 3 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004228659.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  plas 1,  vacu 1,  golg 1,  golg_plas 1  (predict for XP_004228659.2)
Subcellular
localization
TargetP
other 6  (predict for XP_004228659.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101258296
sly-r.6
for
101258296
sot-r.1
for
102601599
nta-r.1
for
107781711
nta-r.1
for
107827515
ath-u.5
for
AT1G23780
ath-u.5
for
AT1G70360
gma-u.5
for
100796338
gma-u.5
for
100778313
bra-r.6
for
103829259
vvi-u.5
for
100246319
ppo-u.5
for
18099149
mtr-u.5
for
25491518
mtr-u.5
for
25485313
mtr-u.5
for
25498397
ghi-r.1
for
121225698
ghi-r.1
for
121214587
ghi-r.1
for
107894200
cit-r.1
for
102621422
cit-r.1
for
102621712
zma-u.5
for
100501928
tae-r.2
for
123092893
tae-r.2
for
123098172
tae-r.2
for
123085102
hvu-r.1
for
123449247
sbi-r.1
for
8085253
bdi-r.1
for
100841467
cre-r.1
for
CHLRE_17g738800v5


Ortholog ID: 5891
Species sly sot nta nta ath ath gma gma bra vvi ppo mtr mtr mtr ghi ghi ghi bna cit cit zma tae tae tae hvu sbi bdi cre
Symbol LOC101258296 LOC102601599 LOC107781711 LOC107827515 AT1G23780 AT1G70360 LOC100796338 LOC100778313 LOC103829259 LOC100246319 LOC18099149 LOC25491518 LOC25485313 LOC25498397 LOC121214587 LOC107894200 LOC107887784 LOC106358111 LOC102621422 LOC102621712 LOC100501928 LOC123092893 LOC123098172 LOC123085102 LOC123449247 LOC8085253 LOC100841467 CHLRE_17g738800v5
Function* F-box protein SKIP22 F-box protein SKIP22-like F-box protein SKIP22 F-box protein SKIP22-like F-box family protein F-box family protein F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22-like F-box protein SKIP22 putative F-box protein At1g23770 F-box protein SKIP22 putative F-box protein At1g23770 F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22-like putative F-box protein At1g23770 F-box protein SKIP22-like uncharacterized LOC100501928 F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22 F-box protein SKIP22-like F-box protein SKIP22 F-box protein SKIP22-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03050 Proteasome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 8
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna00513 Various types of N-glycan biosynthesis 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit04016 MAPK signaling pathway - plant 2
cit04070 Phosphatidylinositol signaling system 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101258296 102601599 107781711 107827515 838989 843372 100796338 100778313 103829259 100246319 18099149 25491518 25485313 25498397 121214587 107894200 107887784 106358111 102621422 102621712 100501928 123092893 123098172 123085102 123449247 8085253 100841467 66057149
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