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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101258423  large ribosomal subunit protein uL23-like 
 sly-r.6  101258423  large ribosomal subunit protein uL23-like 
 sly-u.5  101247574  large ribosomal subunit protein uL23-like 
 sly-u.5  101246658  large ribosomal subunit protein uL23 
 sot-r.1  102578219  60S ribosomal protein L23a-like 
 sot-r.1  102600627  60S ribosomal protein L23a-like 
 nta-r.1  107763824  large ribosomal subunit protein uL23-like 
 nta-r.1  107828734  large ribosomal subunit protein uL23-like 
 nta-r.1  107821921  large ribosomal subunit protein uL23-like 
 ath-u.5  RPL23AA  ribosomal protein L23AA 
 ath-u.5  RPL23AB  ribosomal protein L23AB 
 gma-u.5  100777933  60S ribosomal protein L23a 
 gma-u.5  100785534  60S ribosomal protein L23A 
 gma-u.5  100778548  60S ribosomal protein L23a-like 
 bra-r.6  103865723  60S ribosomal protein L23a-1 
 bra-r.6  103841438  60S ribosomal protein L23a-2 
 vvi-u.5  100262091  60S ribosomal protein L23A-like 
 vvi-u.5  100254719  large ribosomal subunit protein uL23 
 vvi-u.5  100246504  large ribosomal subunit protein uL23 
 ppo-u.5  7489278  60S ribosomal protein L23a 
 ppo-u.5  7469814  60S ribosomal protein L23a 
 ppo-u.5  7491944  60S ribosomal protein L23a 
 mtr-u.5  11415929  60S ribosomal protein L23a 
 mtr-u.5  25497704  60S ribosomal protein L23a-2 
 mtr-u.5  11413266  60S ribosomal protein L23a-2 
 ghi-r.1  107897793  60S ribosomal protein L23a 
 ghi-r.1  107906169  60S ribosomal protein L23A 
 ghi-r.1  107930746  60S ribosomal protein L23a 
 bna-r.1  106411675  60S ribosomal protein L23a-2 
 bna-r.1  106420754  60S ribosomal protein L23a-1 
 bna-r.1  106367522  60S ribosomal protein L23a-2 
 cit-r.1  102620310  60S ribosomal protein L23A 
 cit-r.1  102630069  60S ribosomal protein L23a 
 osa-u.5  4336307  60S ribosomal protein L23A 
 osa-u.5  4326469  large ribosomal subunit protein uL23 
 zma-u.5  100280771  60S ribosomal protein L23a 
 zma-u.5  103635211  uncharacterized LOC103635211 
 zma-u.5  100283914  60S ribosomal protein L23a 
 tae-r.2  123045935  60S ribosomal protein L23A 
 tae-r.2  123053802  60S ribosomal protein L23A 
 tae-r.2  123189664  60S ribosomal protein L23A 
 hvu-r.1  123427148  60S ribosomal protein L23A 
 sbi-r.1  110436529  60S ribosomal protein L23a-like 
 sbi-r.1  110431282  60S ribosomal protein L23A-like 
 bdi-r.1  100840552  60S ribosomal protein L23A 
 bdi-r.1  100823942  60S ribosomal protein L23A 
 cre-r.1  CHLRE_06g282500v5  ribosomal protein L23a 

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Top 50 coexpressed genes to 101258423 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258423 (sly-u.5 coexpression data)

CoexMap"101258423"


slyLOC101258423 | Entrez gene ID : 101258423
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 3 2 3 3 3 3 3 2 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (27 genes)  IEA  
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (76 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
Protein XP_004249523.1 [sequence] [blastp]
XP_010312279.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_004249523.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_010312279.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for XP_004249523.1)
other 6,  chlo 6  (predict for XP_010312279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101258423


sly-r.6
for
101258423


sly-u.5
for
101247574


sly-u.5
for
101246658


sot-r.1
for
102578219


sot-r.1
for
102600627


nta-r.1
for
107763824


nta-r.1
for
107828734


nta-r.1
for
107821921


ath-u.5
for
RPL23AA


ath-u.5
for
RPL23AB


gma-u.5
for
100777933


gma-u.5
for
100785534


gma-u.5
for
100778548


bra-r.6
for
103865723


bra-r.6
for
103841438


vvi-u.5
for
100262091


vvi-u.5
for
100254719


vvi-u.5
for
100246504


ppo-u.5
for
7489278


ppo-u.5
for
7469814


ppo-u.5
for
7491944


mtr-u.5
for
11415929


mtr-u.5
for
25497704


mtr-u.5
for
11413266


ghi-r.1
for
107897793


ghi-r.1
for
107906169


ghi-r.1
for
107930746


bna-r.1
for
106411675


bna-r.1
for
106420754


bna-r.1
for
106367522


cit-r.1
for
102620310


cit-r.1
for
102630069


osa-u.5
for
4336307


osa-u.5
for
4326469


zma-u.5
for
100280771


zma-u.5
for
103635211


zma-u.5
for
100283914


tae-r.2
for
123045935


tae-r.2
for
123053802


tae-r.2
for
123189664


hvu-r.1
for
123427148


sbi-r.1
for
110436529


sbi-r.1
for
110431282


bdi-r.1
for
100840552


bdi-r.1
for
100823942


cre-r.1
for
CHLRE_06g282500v5



Ortholog ID: 1495
Species sly sly sly sot sot nta nta nta ath ath gma gma gma bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC101258423 LOC101247574 LOC101246658 LOC102578219 LOC102600627 LOC107821921 LOC107796789 LOC107771404 RPL23AA RPL23AB LOC100778548 LOC100779362 LOC100500043 LOC103865723 LOC100262091 LOC100254719 LOC100246504 LOC7491944 LOC7489596 LOC7465270 LOC11415929 LOC25497704 LOC11413266 LOC107963930 LOC107959083 LOC107932494 LOC106420754 LOC106367522 LOC106395928 LOC102620310 LOC102630069 LOC4336307 LOC4326469 LOC100280771 LOC103635211 LOC100283914 LOC123045935 LOC123053802 LOC123189664 LOC123427148 LOC110436529 LOC110431282 LOC100840552 LOC100823942 CHLRE_06g282500v5
Function* large ribosomal subunit protein uL23-like large ribosomal subunit protein uL23-like large ribosomal subunit protein uL23 60S ribosomal protein L23a-like 60S ribosomal protein L23a-like large ribosomal subunit protein uL23-like 60S ribosomal protein L23a large ribosomal subunit protein uL23-like ribosomal protein L23AA ribosomal protein L23AB 60S ribosomal protein L23a-like 60S ribosomal protein L23A uncharacterized LOC100500043 60S ribosomal protein L23a-1 60S ribosomal protein L23A-like large ribosomal subunit protein uL23 large ribosomal subunit protein uL23 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a 60S ribosomal protein L23a-2 60S ribosomal protein L23a-2 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23a-1 60S ribosomal protein L23a-2 60S ribosomal protein L23a-1 60S ribosomal protein L23A 60S ribosomal protein L23a 60S ribosomal protein L23A large ribosomal subunit protein uL23 60S ribosomal protein L23a uncharacterized LOC103635211 60S ribosomal protein L23a 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23A 60S ribosomal protein L23a-like 60S ribosomal protein L23A-like 60S ribosomal protein L23A 60S ribosomal protein L23A ribosomal protein L23a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101258423 101247574 101246658 102578219 102600627 107821921 107796789 107771404 818531 824694 100778548 100779362 100500043 103865723 100262091 100254719 100246504 7491944 7489596 7465270 11415929 25497704 11413266 107963930 107959083 107932494 106420754 106367522 106395928 102620310 102630069 4336307 4326469 100280771 103635211 100283914 123045935 123053802 123189664 123427148 110436529 110431282 100840552 100823942 5720945
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