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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259483   protein NUCLEAR FUSION DEFECTIVE 4-like 
 sly-r.6   101259483   protein NUCLEAR FUSION DEFECTIVE 4-like 
 sly-u.5   101262446   protein NUCLEAR FUSION DEFECTIVE 4 
 sot-r.1   102585131   protein NUCLEAR FUSION DEFECTIVE 4-like 
 sot-r.1   102587626   protein NUCLEAR FUSION DEFECTIVE 4-like 
 sot-r.1   102584367   protein NUCLEAR FUSION DEFECTIVE 4-like 
 nta-r.1   107831850   protein NUCLEAR FUSION DEFECTIVE 4-like 
 nta-r.1   107765358   protein NUCLEAR FUSION DEFECTIVE 4 
 nta-r.1   107810322   protein NUCLEAR FUSION DEFECTIVE 4 
 ath-u.5   AT4G19450   Major facilitator superfamily protein 
 ath-u.5   NFD4   Major facilitator superfamily protein 
 gma-u.5   100775725   protein NUCLEAR FUSION DEFECTIVE 4 
 gma-u.5   100804951   protein NUCLEAR FUSION DEFECTIVE 4 
 gma-u.5   100813947   protein NUCLEAR FUSION DEFECTIVE 4 
 bra-r.6   103834121   protein NUCLEAR FUSION DEFECTIVE 4 
 bra-r.6   103840241   protein NUCLEAR FUSION DEFECTIVE 4 
 bra-r.6   103857403   protein NUCLEAR FUSION DEFECTIVE 4 
 vvi-u.5   100262611   protein NUCLEAR FUSION DEFECTIVE 4 
 vvi-u.5   100263024   protein NUCLEAR FUSION DEFECTIVE 4 
 ppo-u.5   7465486   protein NUCLEAR FUSION DEFECTIVE 4 
 ppo-u.5   18094041   protein NUCLEAR FUSION DEFECTIVE 4 
 mtr-u.5   11437992   protein NUCLEAR FUSION DEFECTIVE 4 
 mtr-u.5   11436257   protein NUCLEAR FUSION DEFECTIVE 4 
 mtr-u.5   11405859   protein NUCLEAR FUSION DEFECTIVE 4 
 ghi-r.1   107901032   protein NUCLEAR FUSION DEFECTIVE 4 
 ghi-r.1   107930082   protein NUCLEAR FUSION DEFECTIVE 4 
 ghi-r.1   107900709   protein NUCLEAR FUSION DEFECTIVE 4 
 bna-r.1   106384842   protein NUCLEAR FUSION DEFECTIVE 4-like 
 bna-r.1   106419773   protein NUCLEAR FUSION DEFECTIVE 4-like 
 bna-r.1   106446527   protein NUCLEAR FUSION DEFECTIVE 4-like 
 cit-r.1   102626277   protein NUCLEAR FUSION DEFECTIVE 4 
 osa-u.5   4349562   uncharacterized LOC4349562 
 zma-u.5   112543451   uncharacterized LOC112543451 
 zma-u.5   103651653   Protein NUCLEAR FUSION DEFECTIVE 4 
 zma-u.5   100304406   Protein NUCLEAR FUSION DEFECTIVE 4 
 tae-r.2   123111399   protein NUCLEAR FUSION DEFECTIVE 4 
 hvu-r.1   123399370   uncharacterized LOC123399370 
 bdi-r.1   100835787   protein DETOXIFICATION 44, chloroplastic 

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Top 50 coexpressed genes to 101259483 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259483 (sly-u.5 coexpression data)

CoexMap"101259483"


slyLOC101259483 | Entrez gene ID : 101259483    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu bdi cre sbi
Paralog 3 3 3 2 3 3 2 2 3 3 3 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
Protein XP_004229530.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 2,  E.R._plas 2,  vacu 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1  (predict for XP_004229530.2)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_004229530.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259483
sly-r.6
for
101259483
sly-u.5
for
101262446
sot-r.1
for
102585131
sot-r.1
for
102587626
sot-r.1
for
102584367
nta-r.1
for
107831850
nta-r.1
for
107765358
nta-r.1
for
107810322
ath-u.5
for
AT4G19450
ath-u.5
for
NFD4
gma-u.5
for
100775725
gma-u.5
for
100804951
gma-u.5
for
100813947
bra-r.6
for
103834121
bra-r.6
for
103840241
bra-r.6
for
103857403
vvi-u.5
for
100262611
vvi-u.5
for
100263024
ppo-u.5
for
7465486
ppo-u.5
for
18094041
mtr-u.5
for
11437992
mtr-u.5
for
11436257
mtr-u.5
for
11405859
ghi-r.1
for
107901032
ghi-r.1
for
107930082
ghi-r.1
for
107900709
bna-r.1
for
106384842
bna-r.1
for
106419773
bna-r.1
for
106446527
cit-r.1
for
102626277
osa-u.5
for
4349562
zma-u.5
for
112543451
zma-u.5
for
103651653
zma-u.5
for
100304406
tae-r.2
for
123111399
hvu-r.1
for
123399370
bdi-r.1
for
100835787


Ortholog ID: 1971
Species sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna cit osa zma zma zma tae hvu bdi
Symbol LOC101259483 LOC101262446 LOC102585131 LOC102584367 LOC102603438 LOC107831850 LOC107765358 LOC107810322 AT4G19450 NFD4 AT5G45275 LOC100775725 LOC100804951 LOC100813947 LOC103834121 LOC103853620 LOC100262611 LOC100263024 LOC7465486 LOC18094041 LOC11437992 LOC11436257 LOC11405859 LOC107901032 LOC107900709 LOC107913320 LOC106353158 LOC102626277 LOC4349562 LOC112543451 LOC103651653 LOC100304406 LOC123111399 LOC123399370 LOC100835787
Function* protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 Major facilitator superfamily protein Major facilitator superfamily protein Major facilitator superfamily protein protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4-like protein NUCLEAR FUSION DEFECTIVE 4 uncharacterized LOC4349562 uncharacterized LOC112543451 Protein NUCLEAR FUSION DEFECTIVE 4 Protein NUCLEAR FUSION DEFECTIVE 4 protein NUCLEAR FUSION DEFECTIVE 4 uncharacterized LOC123399370 protein DETOXIFICATION 44, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 5
sot00909 Sesquiterpenoid and triterpenoid biosynthesis 3
sot03018 RNA degradation 2
sot00940 Phenylpropanoid biosynthesis 2
sot00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00591 Linoleic acid metabolism 2
ath00592 alpha-Linolenic acid metabolism 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 5
ath04981 Folate transport and metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 4
ath00500 Starch and sucrose metabolism 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00052 Galactose metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
gma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
vvi00940 Phenylpropanoid biosynthesis 4
vvi04712 Circadian rhythm - plant 3
vvi00360 Phenylalanine metabolism 2
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo04626 Plant-pathogen interaction 2
ppo00750 Vitamin B6 metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 14
mtr04712 Circadian rhythm - plant 12
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi00230 Purine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00450 Selenocompound metabolism 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 7
cit00941 Flavonoid biosynthesis 4
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
osa00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00740 Riboflavin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259483 101262446 102585131 102584367 102603438 107831850 107765358 107810322 827686 840037 2746193 100775725 100804951 100813947 103834121 103853620 100262611 100263024 7465486 18094041 11437992 11436257 11405859 107901032 107900709 107913320 106353158 102626277 4349562 112543451 103651653 100304406 123111399 123399370 100835787
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