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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259995   uncharacterized LOC101259995 
 sly-r.6   101259995   uncharacterized LOC101259995 
 ath-u.5   AT5G14460   Pseudouridine synthase family protein 
 gma-u.5   100793939   uncharacterized LOC100793939 
 vvi-u.5   100259460   uncharacterized LOC100259460 
 ppo-u.5   18095326   uncharacterized LOC18095326 
 mtr-u.5   25495110   uncharacterized LOC25495110 
 osa-u.5   4337577   uncharacterized LOC4337577 
 zma-u.5   100284263   pseudouridylate synthase/ transporter 

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Top 50 coexpressed genes to 101259995 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259995 (sly-u.5 coexpression data)

CoexMap"101259995"


slyLOC101259995 | Entrez gene ID : 101259995      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990481 [list] [network] mRNA pseudouridine synthesis  (4 genes)  IEA  
GO:0006400 [list] [network] tRNA modification  (100 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004231838.1 [sequence] [blastp]
XP_069150714.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_004231838.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_069150714.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_004231838.1)
chlo 5  (predict for XP_069150714.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259995

.
sly-r.6
for
101259995

.
ath-u.5
for
AT5G14460

.
gma-u.5
for
100793939

.
vvi-u.5
for
100259460

.
ppo-u.5
for
18095326

.
mtr-u.5
for
25495110

.
osa-u.5
for
4337577

.
zma-u.5
for
100284263

.


Ortholog ID: 10930
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G14460 LOC100793939 LOC101259995 LOC4337577 LOC100284263 LOC103846483 LOC100259460 LOC18095326 LOC25495110 LOC123186027 LOC123179896 LOC123438523 LOC107926046 LOC107897898 LOC106372097 BNAC09G43050D CHLRE_16g690250v5 LOC110430510 LOC102583778 LOC102611441 LOC104583266 LOC107791527 LOC107788494
Function* Pseudouridine synthase family protein uncharacterized LOC100793939 uncharacterized LOC101259995 uncharacterized LOC4337577 pseudouridylate synthase/ transporter uncharacterized LOC103846483 uncharacterized LOC100259460 uncharacterized LOC18095326 uncharacterized LOC25495110 uncharacterized LOC123186027 uncharacterized LOC123179896 uncharacterized LOC123438523 uncharacterized LOC107926046 uncharacterized LOC107897898 uncharacterized LOC106372097 uncharacterized BNAC09G43050D uncharacterized protein uncharacterized LOC110430510 uncharacterized LOC102583778 uncharacterized LOC102611441 uncharacterized LOC104583266 uncharacterized LOC107791527 uncharacterized LOC107788494
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00860 Porphyrin metabolism 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00860 Porphyrin metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi00330 Arginine and proline metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831297 100793939 101259995 4337577 100284263 103846483 100259460 18095326 25495110 123186027 123179896 123438523 107926046 107897898 106372097 106418384 5724795 110430510 102583778 102611441 104583266 107791527 107788494
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