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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261621   vacuolar-sorting protein BRO1 
 sly-r.6   101261621   vacuolar-sorting protein BRO1 
 sly-u.5   101245450   vacuolar-sorting protein BRO1-like 
 ath-u.5   AT1G15130   Endosomal targeting BRO1-like domain-containing protein 
 gma-u.5   100802927   vacuolar-sorting protein BRO1 
 gma-u.5   100795465   vacuolar-sorting protein BRO1 
 vvi-u.5   100245656   vacuolar-sorting protein BRO1 
 ppo-u.5   7475548   vacuolar-sorting protein BRO1 
 ppo-u.5   7488385   vacuolar-sorting protein BRO1 
 mtr-u.5   11440696   vacuolar-sorting protein BRO1 
 osa-u.5   4348999   vacuolar-sorting protein BRO1 
 zma-u.5   100383198   Endosomal targeting BRO1-like domain-containing protein 
 zma-u.5   100286189   ALG2-interacting protein X 

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Top 50 coexpressed genes to 101261621 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261621 (sly-u.5 coexpression data)

CoexMap"101261621"


slyLOC101261621 | Entrez gene ID : 101261621    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03250 [list] [network] Viral life cycle - HIV-1 (38 genes)
sly03272 [list] [network] Virion - Hepatitis viruses (15 genes)
sly04144 [list] [network] Endocytosis (167 genes)
GO BP
GO:0043328 [list] [network] protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway  (15 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (168 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004238866.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  extr 3,  mito 1,  E.R. 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for XP_004238866.1)
Subcellular
localization
TargetP
scret 5,  other 4  (predict for XP_004238866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261621

.
sly-r.6
for
101261621

.
sly-u.5
for
101245450

.
ath-u.5
for
AT1G15130

.
gma-u.5
for
100802927

.
gma-u.5
for
100795465

.
vvi-u.5
for
100245656

.
ppo-u.5
for
7475548

.
ppo-u.5
for
7488385

.
mtr-u.5
for
11440696

.
osa-u.5
for
4348999

.
zma-u.5
for
100383198

.
zma-u.5
for
100286189

.


Ortholog ID: 6127
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT1G15130 LOC100795465 LOC100802927 LOC101245450 LOC101261621 LOC4348999 LOC100383198 LOC100286189 LOC103872304 LOC103842916 LOC100245656 LOC7475548 LOC7488385 LOC11440696 LOC123181159 LOC123122313 LOC123432180 LOC107909556 LOC107948240 LOC106367056 LOC106346688 CHLRE_01g004350v5 LOC8065814 LOC102584129 LOC102601117 LOC102623501 LOC100833603 LOC107771400 LOC107826739
Function* Endosomal targeting BRO1-like domain-containing protein vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1-like vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 Endosomal targeting BRO1-like domain-containing protein ALG2-interacting protein X vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 uncharacterized protein ALG-2 interacting protein X ALG-2 interacting protein X-like ALG-2 interacting protein X vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1 vacuolar-sorting protein BRO1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 7
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 5
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 6
bra04144 Endocytosis 3
bra04120 Ubiquitin mediated proteolysis 2
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04144 Endocytosis 5
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu03250 Viral life cycle - HIV-1 2
hvu03272 Virion - Hepatitis viruses 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 5
bna04144 Endocytosis 5
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
bna03272 Virion - Hepatitis viruses 4
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre03250 Viral life cycle - HIV-1 3
cre03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 6
sot04142 Lysosome 3
sot05100 Bacterial invasion of epithelial cells 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 5
cit04141 Protein processing in endoplasmic reticulum 3
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 12
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838077 100795465 100802927 101245450 101261621 4348999 100383198 100286189 103872304 103842916 100245656 7475548 7488385 11440696 123181159 123122313 123432180 107909556 107948240 106367056 106346688 5727677 8065814 102584129 102601117 102623501 100833603 107771400 107826739
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