ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101261913	protein trichome berefringence-like 7
sly-r.6	101261913	protein trichome berefringence-like 7
sly-u.5	101246006	protein trichome berefringence-like 7
sot-r.1	102582979	protein trichome berefringence-like 7
sot-r.1	102596462	protein trichome berefringence-like 7
nta-r.1	107783723	protein trichome berefringence-like 7
nta-r.1	107776292	protein trichome berefringence-like 7
nta-r.1	107826606	protein trichome berefringence-like 7
ath-u.5	TBL7	TRICHOME BIREFRINGENCE-LIKE 7
gma-u.5	100802445	protein trichome berefringence-like 7
gma-u.5	100784384	protein trichome berefringence-like 7
gma-u.5	100777877	protein trichome berefringence-like 7
bra-r.6	103832975	protein trichome berefringence-like 7
vvi-u.5	100252383	protein trichome berefringence-like 7
vvi-u.5	100257418	protein trichome berefringence-like 7
ppo-u.5	7479126	protein trichome berefringence-like 7
ppo-u.5	7466416	protein trichome berefringence-like 7
mtr-u.5	11415360	protein trichome berefringence-like 7
mtr-u.5	11427038	protein trichome berefringence-like 7
ghi-r.1	107952060	protein trichome berefringence-like 7
ghi-r.1	107910644	protein trichome berefringence-like 7
ghi-r.1	107904045	protein trichome berefringence-like 7
bna-r.1	125576991	protein trichome berefringence-like 7
bna-r.1	106360509	protein trichome berefringence-like 7
cit-r.1	102618893	protein trichome berefringence-like 7
cit-r.1	102611705	protein trichome berefringence-like 7
osa-u.5	4338853	protein trichome berefringence-like 7
osa-u.5	4324843	protein trichome berefringence-like 7
zma-u.5	109941581	protein trichome berefringence-like 7
zma-u.5	100275749	uncharacterized LOC100275749
zma-u.5	100275566	putative DUF231 domain containing family protein
tae-r.2	123080156	protein trichome berefringence-like 7
tae-r.2	123134175	protein trichome berefringence-like 7
tae-r.2	123056814	protein trichome berefringence-like 7
hvu-r.1	123443207	protein trichome berefringence-like 7
hvu-r.1	123445138	protein trichome berefringence-like 7
sbi-r.1	8061015	protein trichome berefringence-like 7
sbi-r.1	8077130	protein trichome berefringence-like 7
sbi-r.1	8058479	protein trichome berefringence-like 7
bdi-r.1	100846810	protein trichome berefringence-like 7
bdi-r.1	100846079	protein trichome berefringence-like 7

Top 50 coexpressed genes to 101261913 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101261913 (sly-u.5 coexpression data)

CoexMap"101261913"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(494 genes)

IEA

GO MF

GO:0016413 [list] [network] O-acetyltransferase activity

(68 genes)

IEA

Protein

XP_004237733.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 2, mito 2, chlo 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1

(predict for XP_004237733.1)

Subcellular
localization
TargetP

other 8

(predict for XP_004237733.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101261913	sly-r.6 for 101261913	sly-u.5 for 101246006	sot-r.1 for 102582979	sot-r.1 for 102596462	nta-r.1 for 107783723	nta-r.1 for 107776292	nta-r.1 for 107826606	ath-u.5 for TBL7	gma-u.5 for 100802445	gma-u.5 for 100784384	gma-u.5 for 100777877	bra-r.6 for 103832975	vvi-u.5 for 100252383	vvi-u.5 for 100257418	ppo-u.5 for 7479126	ppo-u.5 for 7466416	mtr-u.5 for 11415360	mtr-u.5 for 11427038	ghi-r.1 for 107952060	ghi-r.1 for 107910644	ghi-r.1 for 107904045	bna-r.1 for 125576991	bna-r.1 for 106360509	cit-r.1 for 102618893	cit-r.1 for 102611705	osa-u.5 for 4338853	osa-u.5 for 4324843	zma-u.5 for 109941581	zma-u.5 for 100275749	zma-u.5 for 100275566	tae-r.2 for 123080156	tae-r.2 for 123134175	tae-r.2 for 123056814	hvu-r.1 for 123443207	hvu-r.1 for 123445138	sbi-r.1 for 8061015	sbi-r.1 for 8077130	sbi-r.1 for 8058479	bdi-r.1 for 100846810	bdi-r.1 for 100846079

Ortholog

Ortholog ID: 4008

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

TBL7

Function^*

protein trichome berefringence-like 7

TRICHOME BIREFRINGENCE-LIKE 7

protein trichome berefringence-like 7

uncharacterized LOC100275749

putative DUF231 domain containing family protein

protein trichome berefringence-like 7

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	4
sly00941	Flavonoid biosynthesis	3
sly00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
sly01200	Carbon metabolism	2
sly00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	4
gma01232	Nucleotide metabolism	4
gma01240	Biosynthesis of cofactors	4
gma00730	Thiamine metabolism	3
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03015	mRNA surveillance pathway	3
mtr00053	Ascorbate and aldarate metabolism	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01240	Biosynthesis of cofactors	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	10
ghi03022	Basal transcription factors	2
ghi03420	Nucleotide excision repair	2
ghi00061	Fatty acid biosynthesis	2
ghi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00514	Other types of O-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00514	Other types of O-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00510	N-Glycan biosynthesis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	7
tae00360	Phenylalanine metabolism	4
tae00561	Glycerolipid metabolism	3
tae00941	Flavonoid biosynthesis	3
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00350	Tyrosine metabolism	2
hvu00620	Pyruvate metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00051	Fructose and mannose metabolism	2
sbi00260	Glycine, serine and threonine metabolism	2
sbi00630	Glyoxylate and dicarboxylate metabolism	2
sbi00670	One carbon pool by folate	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	4
bdi00670	One carbon pool by folate	2

Expression

Expression pattern

Entrez Gene ID^*

101261913

101246006

102582979

102596462

107783723

107776292

142167158

841310

100802445

100784384

100777877

103832975

100252383

100257418

7479126

7466416

11415360

11427038

107952060

107904045

107957327

125576991

106360509

102618893

102611705

4338853

4324843

109941581

100275749

100275566

123056814

123182098

123062960

123443207

123445138

8061015

8077130

8058479

100846810

100846079

The preparation time of this page was 0.2 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	1	3	1	2	2	2	3	2	2	2	3	3	2	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101261913 (sly-u.5 coexpression data)

Top 50 enrichment test to 101261913 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**