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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262260   protein CURVATURE THYLAKOID 1B, chloroplastic 
 sly-r.6   101262260   protein CURVATURE THYLAKOID 1B, chloroplastic 
 sly-m.5   101262260   protein CURVATURE THYLAKOID 1B, chloroplastic 
 sot-r.1   102602283   protein CURVATURE THYLAKOID 1B, chloroplastic 
 nta-r.1   107816925   protein CURVATURE THYLAKOID 1B, chloroplastic 
 nta-r.1   107763650   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ath-u.5   PSI-P   photosystem I P subunit 
 gma-u.5   100793015   protein CURVATURE THYLAKOID 1B, chloroplastic 
 gma-u.5   100790668   protein CURVATURE THYLAKOID 1B, chloroplastic 
 gma-u.5   100306676   protein CURVATURE THYLAKOID 1B-like 
 bra-r.6   103866429   protein CURVATURE THYLAKOID 1B, chloroplastic 
 vvi-u.5   100248815   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ppo-u.5   7478806   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ppo-u.5   7455368   protein CURVATURE THYLAKOID 1B, chloroplastic 
 mtr-u.5   25500606   protein CURVATURE THYLAKOID 1B, chloroplastic 
 mtr-u.5   11433472   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ghi-r.1   107922952   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ghi-r.1   107912278   protein CURVATURE THYLAKOID 1B, chloroplastic 
 bna-r.1   106415795   protein CURVATURE THYLAKOID 1B, chloroplastic 
 bna-r.1   106391968   protein CURVATURE THYLAKOID 1B, chloroplastic 
 bna-r.1   106450472   protein CURVATURE THYLAKOID 1B, chloroplastic 
 cit-r.1   102626754   protein CURVATURE THYLAKOID 1B, chloroplastic 
 osa-u.5   4343189   protein CURVATURE THYLAKOID 1B, chloroplastic 
 osa-u.5   4349239   protein CURVATURE THYLAKOID 1B, chloroplastic 
 zma-u.5   100283753   uncharacterized LOC100283753 
 zma-u.5   100191656   uncharacterized LOC100191656 
 tae-r.2   123051088   protein CURVATURE THYLAKOID 1B, chloroplastic 
 tae-r.2   123052695   protein CURVATURE THYLAKOID 1B, chloroplastic 
 tae-r.2   123091653   protein CURVATURE THYLAKOID 1B, chloroplastic 
 hvu-r.1   123411091   protein CURVATURE THYLAKOID 1B, chloroplastic-like 
 sbi-r.1   110434414   protein CURVATURE THYLAKOID 1B, chloroplastic-like 
 sbi-r.1   8077266   protein CURVATURE THYLAKOID 1B, chloroplastic 
 bdi-r.1   100834583   protein CURVATURE THYLAKOID 1B, chloroplastic 
 bdi-r.1   100824106   protein CURVATURE THYLAKOID 1B, chloroplastic 

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Top 50 coexpressed genes to 101262260 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262260 (sly-u.5 coexpression data)

CoexMap"101262260"


slyLOC101262260 | Entrez gene ID : 101262260      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 3 1 1 2 2 2 3 1 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (117 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (181 genes)  IEA  
GO MF
Protein XP_004248418.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  extr 1  (predict for XP_004248418.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004248418.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262260
sly-r.6
for
101262260
sly-m.5
for
101262260
sot-r.1
for
102602283
nta-r.1
for
107816925
nta-r.1
for
107763650
ath-u.5
for
PSI-P
gma-u.5
for
100793015
gma-u.5
for
100790668
gma-u.5
for
100306676
bra-r.6
for
103866429
vvi-u.5
for
100248815
ppo-u.5
for
7478806
ppo-u.5
for
7455368
mtr-u.5
for
25500606
mtr-u.5
for
11433472
ghi-r.1
for
107922952
ghi-r.1
for
107912278
bna-r.1
for
106415795
bna-r.1
for
106391968
bna-r.1
for
106450472
cit-r.1
for
102626754
osa-u.5
for
4343189
osa-u.5
for
4349239
zma-u.5
for
100283753
zma-u.5
for
100191656
tae-r.2
for
123051088
tae-r.2
for
123052695
tae-r.2
for
123091653
hvu-r.1
for
123411091
sbi-r.1
for
110434414
sbi-r.1
for
8077266
bdi-r.1
for
100834583
bdi-r.1
for
100824106


Ortholog ID: 5718
Species sly sot nta nta ath gma gma gma bra vvi ppo ppo mtr mtr ghi ghi bna bna bna cit osa osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC101262260 LOC102602283 LOC107816925 LOC107763650 PSI-P LOC100793015 LOC100790668 LOC100306403 LOC103866429 LOC100248815 LOC7478806 LOC7455368 LOC25500606 LOC11433472 LOC107922952 LOC107912278 LOC106415795 LOC106391968 LOC106450472 LOC102626754 LOC4343189 LOC4349239 LOC100283753 LOC100191656 LOC123051088 LOC123052695 LOC123188560 LOC123411091 LOC110434414 LOC8077266 LOC100834583 LOC100824106
Function* protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic photosystem I P subunit protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic uncharacterized LOC100306403 protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic uncharacterized LOC100283753 uncharacterized LOC100191656 protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic-like protein CURVATURE THYLAKOID 1B, chloroplastic-like protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 6
sly03010 Ribosome 5
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma01200 Carbon metabolism 3
gma00710 Carbon fixation by Calvin cycle 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 10
gma01200 Carbon metabolism 10
gma00030 Pentose phosphate pathway 3
gma00195 Photosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 7
gma01200 Carbon metabolism 7
gma00195 Photosynthesis 5
gma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00195 Photosynthesis 4
vvi00630 Glyoxylate and dicarboxylate metabolism 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00195 Photosynthesis 4
mtr00710 Carbon fixation by Calvin cycle 4
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00710 Carbon fixation by Calvin cycle 4
zma01230 Biosynthesis of amino acids 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 2
tae00030 Pentose phosphate pathway 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae01200 Carbon metabolism 3
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu01240 Biosynthesis of cofactors 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 6
bdi01200 Carbon metabolism 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00195 Photosynthesis 4
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 10
bdi00710 Carbon fixation by Calvin cycle 8
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi00195 Photosynthesis 2
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262260 102602283 107816925 107763650 819295 100793015 100790668 100306403 103866429 100248815 7478806 7455368 25500606 11433472 107922952 107912278 106415795 106391968 106450472 102626754 4343189 4349239 100283753 100191656 123051088 123052695 123188560 123411091 110434414 8077266 100834583 100824106
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