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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262377   uncharacterized LOC101262377 
 sly-r.6   101262377   uncharacterized LOC101262377 
 sot-r.1   102582001   putative rRNA methyltransferase YlbH 
 nta-r.1   107776930   uncharacterized LOC107776930 
 nta-r.1   107759129   uncharacterized LOC107759129 
 ath-u.5   AT3G28460   methyltransferase 
 gma-u.5   100794653   putative rRNA methyltransferase YlbH 
 bra-r.6   103875150   putative rRNA methyltransferase YlbH 
 vvi-u.5   100261175   uncharacterized LOC100261175 
 ppo-u.5   7496823   uncharacterized LOC7496823 
 mtr-u.5   11418738   putative rRNA methyltransferase YlbH 
 ghi-r.1   107955555   putative rRNA methyltransferase YlbH 
 ghi-r.1   107958602   putative rRNA methyltransferase YlbH 
 bna-r.1   106391424   putative rRNA methyltransferase YlbH 
 bna-r.1   106415618   putative rRNA methyltransferase YlbH 
 cit-r.1   102611892   hypothetical protein 
 osa-u.5   4334030   uncharacterized LOC4334030 
 zma-u.5   100382446   uncharacterized LOC100382446 
 tae-r.2   123091029   putative rRNA methyltransferase YlbH 
 tae-r.2   123096036   putative rRNA methyltransferase YlbH 
 tae-r.2   123086948   putative rRNA methyltransferase YlbH 
 hvu-r.1   123447701   putative rRNA methyltransferase YlbH 
 sbi-r.1   8060510   putative rRNA methyltransferase YlbH 
 bdi-r.1   100845948   putative rRNA methyltransferase YlbH 
 cre-r.1   CHLRE_13g566300v5   uncharacterized protein 

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Top 50 coexpressed genes to 101262377 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262377 (sly-u.5 coexpression data)

CoexMap"101262377"


slyLOC101262377 | Entrez gene ID : 101262377      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031167 [list] [network] rRNA methylation  (23 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (286 genes)  IEA  
Protein XP_004233343.2 [sequence] [blastp]
XP_019067770.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  pero 1,  E.R._vacu 1  (predict for XP_004233343.2)
chlo 7,  vacu 1,  E.R._vacu 1,  nucl 1,  pero 1  (predict for XP_019067770.2)
Subcellular
localization
TargetP
chlo 7,  scret 4  (predict for XP_004233343.2)
chlo 7,  scret 4  (predict for XP_019067770.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262377
sly-r.6
for
101262377
sot-r.1
for
102582001
nta-r.1
for
107776930
nta-r.1
for
107759129
ath-u.5
for
AT3G28460
gma-u.5
for
100794653
bra-r.6
for
103875150
vvi-u.5
for
100261175
ppo-u.5
for
7496823
mtr-u.5
for
11418738
ghi-r.1
for
107955555
ghi-r.1
for
107958602
bna-r.1
for
106391424
bna-r.1
for
106415618
cit-r.1
for
102611892
osa-u.5
for
4334030
zma-u.5
for
100382446
tae-r.2
for
123091029
tae-r.2
for
123096036
tae-r.2
for
123086948
hvu-r.1
for
123447701
sbi-r.1
for
8060510
bdi-r.1
for
100845948
cre-r.1
for
CHLRE_13g566300v5


Ortholog ID: 10799
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101262377 LOC102582001 LOC107776930 LOC107759129 AT3G28460 LOC100794653 LOC103875150 LOC100261175 LOC7496823 LOC11418738 LOC107955555 LOC107958602 LOC106391424 LOC106415618 LOC102611892 LOC4334030 LOC100382446 LOC123091029 LOC123096036 LOC123086948 LOC123447701 LOC8060510 LOC100845948 CHLRE_13g566300v5
Function* uncharacterized LOC101262377 putative rRNA methyltransferase YlbH uncharacterized LOC107776930 uncharacterized LOC107759129 methyltransferase putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH uncharacterized LOC100261175 uncharacterized LOC7496823 putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH hypothetical protein uncharacterized LOC4334030 uncharacterized LOC100382446 putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH putative rRNA methyltransferase YlbH uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta03450 Non-homologous end-joining 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03450 Non-homologous end-joining 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 3
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262377 102582001 107776930 107759129 822476 100794653 103875150 100261175 7496823 11418738 107955555 107958602 106391424 106415618 102611892 4334030 100382446 123091029 123096036 123086948 123447701 8060510 100845948 5719057
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