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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262575   Zinc finger transcription factor 61 
 sly-r.6   101262575   Zinc finger transcription factor 61 
 sly-u.5   101253177   zinc finger CCCH domain-containing protein 49-like 
 ath-u.5   MAC5B   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 ath-u.5   MAC5A   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 gma-u.5   100789382   zinc finger CCCH domain-containing protein 40 
 gma-u.5   100810440   zinc finger CCCH domain-containing protein 25 
 gma-u.5   100778975   zinc finger CCCH domain-containing protein 4 
 vvi-u.5   100241603   zinc finger CCCH domain-containing protein 49 
 ppo-u.5   7468587   zinc finger CCCH domain-containing protein 49 
 mtr-u.5   11439454   zinc finger CCCH domain-containing protein 49 
 osa-u.5   4342926   zinc finger CCCH domain-containing protein 49-like 
 osa-u.5   4340263   zinc finger CCCH domain-containing protein 40-like 
 zma-u.5   100285059   uncharacterized LOC100285059 

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Top 50 coexpressed genes to 101262575 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262575 (sly-u.5 coexpression data)

CoexMap"101262575"


slyLOC101262575 | Entrez gene ID : 101262575      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03040 [list] [network] Spliceosome (385 genes)
GO BP
GO CC
GO:0071006 [list] [network] U2-type catalytic step 1 spliceosome  (4 genes)  IEA  
GO:0071007 [list] [network] U2-type catalytic step 2 spliceosome  (6 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (12 genes)  IEA  
GO MF
GO:0017070 [list] [network] U6 snRNA binding  (5 genes)  IEA  
GO:0036002 [list] [network] pre-mRNA binding  (17 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2359 genes)  IEA  
Protein NP_001307549.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  cyto 2,  cyto_mito 1,  nucl 1  (predict for NP_001307549.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001307549.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262575

.
sly-r.6
for
101262575

.
sly-u.5
for
101253177

.
ath-u.5
for
MAC5B

.
ath-u.5
for
MAC5A

.
gma-u.5
for
100789382

.
gma-u.5
for
100810440

.
gma-u.5
for
100778975

.
vvi-u.5
for
100241603

.
ppo-u.5
for
7468587

.
mtr-u.5
for
11439454

.
osa-u.5
for
4342926

.
osa-u.5
for
4340263

.
zma-u.5
for
100285059

.


Ortholog ID: 5266
Species ath ath gma gma sly sly osa osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol MAC5B MAC5A LOC100789382 LOC100779917 LOC101253177 LOC101262575 LOC4340263 LOC4342926 LOC100285059 LOC103836448 LOC103864977 LOC100241603 LOC7468587 LOC11439454 LOC123151931 LOC123162176 LOC123407170 LOC107932572 LOC107922165 LOC111208744 LOC106389555 CHLRE_02g075650v5 LOC8073843 LOC8072573 LOC102588254 LOC102577515 LOC102630896 LOC100843243 LOC107802168 LOC107759280
Function* CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 49-like Zinc finger transcription factor 61 zinc finger CCCH domain-containing protein 40-like zinc finger CCCH domain-containing protein 49-like uncharacterized LOC100285059 zinc finger CCCH domain-containing protein 4 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 49 zinc finger CCCH domain-containing protein 49 zinc finger CCCH domain-containing protein 49 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 4-like zinc finger CCCH domain-containing protein 25-like uncharacterized protein zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 49-like RRM-containing RNA-binding protein-like protein zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 49-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00260 Glycine, serine and threonine metabolism 2
gma00460 Cyanoamino acid metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa04141 Protein processing in endoplasmic reticulum 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 5
bna01200 Carbon metabolism 5
bna01210 2-Oxocarboxylic acid metabolism 5
bna01230 Biosynthesis of amino acids 5
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817507 837248 100789382 100779917 101253177 101262575 4340263 4342926 100285059 103836448 103864977 100241603 7468587 11439454 123151931 123162176 123407170 107932572 107922165 111208744 106389555 5727200 8073843 8072573 102588254 102577515 102630896 100843243 107802168 107759280
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