ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101262607	L-tryptophan--pyruvate aminotransferase 1-like
sly-r.6	101262607	L-tryptophan--pyruvate aminotransferase 1-like
sly-u.5	101253797	tryptophan aminotransferase-related protein 2
sot-r.1	102603358	L-tryptophan--pyruvate aminotransferase 1-like
nta-r.1	107767293	tryptophan aminotransferase-related protein 2
nta-r.1	107784414	tryptophan aminotransferase-related protein 2-like
nta-r.1	107829568	L-tryptophan--pyruvate aminotransferase 1-like
ath-u.5	TAR2	tryptophan aminotransferase related 2
ath-u.5	TAA1	uncharacterized protein
gma-u.5	100777098	tryptophan aminotransferase-related protein 2
bra-r.6	103852664	L-tryptophan--pyruvate aminotransferase 1
bra-r.6	103831591	L-tryptophan--pyruvate aminotransferase 1
vvi-u.5	100262049	tryptophan aminotransferase-related protein 2
vvi-u.5	100245885	L-tryptophan--pyruvate aminotransferase 1
vvi-u.5	100257504	L-tryptophan--pyruvate aminotransferase 1
ppo-u.5	112328448	L-tryptophan--pyruvate aminotransferase 1
ppo-u.5	112324299	tryptophan aminotransferase-related protein 2
mtr-u.5	11410630	L-tryptophan--pyruvate aminotransferase 1
mtr-u.5	11439449	tryptophan aminotransferase-related protein 2
ghi-r.1	107933665	tryptophan aminotransferase-related protein 2
bna-r.1	106375778	tryptophan aminotransferase-related protein 2
bna-r.1	106395273	L-tryptophan--pyruvate aminotransferase 1
cit-r.1	102612766	tryptophan aminotransferase-related protein 2
osa-u.5	4325198	tryptophan aminotransferase-related protein 2-like
osa-u.5	4337930	tryptophan aminotransferase-related protein 1-like
zma-u.5	103634861	tryptophan aminotransferase-related protein 2
zma-u.5	100272716	uncharacterized LOC100272716
zma-u.5	100285505	alliin lyase 2
tae-r.2	123068780	tryptophan aminotransferase-related protein 2
hvu-r.1	123442807	tryptophan aminotransferase-related protein 2-like
sbi-r.1	8056556	tryptophan aminotransferase-related protein 2

Annotation

functional annotation

KEGG

sly00380 [list] [network] Tryptophan metabolism (57 genes)

sly04075 [list] [network] Plant hormone signal transduction (437 genes)

GO BP

GO:0006520 [list] [network] amino acid metabolic process

(361 genes)

IEA

GO CC

GO MF

GO:0016846 [list] [network] carbon-sulfur lyase activity	(15 genes)	IEA
GO:0008483 [list] [network] transaminase activity	(61 genes)	IEA

Protein

XP_004236246.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, E.R. 3, E.R._plas 2, plas 1, chlo 1, nucl 1, mito 1, chlo_mito 1

(predict for XP_004236246.1)

Subcellular
localization
TargetP

scret 6

(predict for XP_004236246.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101262607	sly-r.6 for 101262607	sly-u.5 for 101253797	sot-r.1 for 102603358	nta-r.1 for 107767293	nta-r.1 for 107784414	nta-r.1 for 107829568	ath-u.5 for TAR2	ath-u.5 for TAA1	gma-u.5 for 100777098	bra-r.6 for 103852664	bra-r.6 for 103831591	vvi-u.5 for 100262049	vvi-u.5 for 100245885	vvi-u.5 for 100257504	ppo-u.5 for 112328448	ppo-u.5 for 112324299	mtr-u.5 for 11410630	mtr-u.5 for 11439449	ghi-r.1 for 107933665	bna-r.1 for 106375778	bna-r.1 for 106395273	cit-r.1 for 102612766	osa-u.5 for 4325198	osa-u.5 for 4337930	zma-u.5 for 103634861	zma-u.5 for 100272716	zma-u.5 for 100285505	tae-r.2 for 123068780	hvu-r.1 for 123442807	sbi-r.1 for 8056556

Ortholog

Ortholog ID: 1432

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

Symbol

TAR2

TAA1

Function^*

L-tryptophan--pyruvate aminotransferase 1-like

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1-like

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2-like

tryptophan aminotransferase related 2

uncharacterized protein

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2

L-tryptophan--pyruvate aminotransferase 1

tryptophan aminotransferase-related protein 2

tryptophan aminotransferase-related protein 2-like

tryptophan aminotransferase-related protein 1-like

uncharacterized LOC100272716

alliin lyase 2

uncharacterized LOC100193435

tryptophan aminotransferase-related protein 1

tryptophan aminotransferase-related protein 2-like

tryptophan aminotransferase-related protein 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00380	Tryptophan metabolism	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	6
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	6
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00910	Nitrogen metabolism	4
ath01230	Biosynthesis of amino acids	3
ath01310	Nitrogen cycle	3
ath00030	Pentose phosphate pathway	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7
ath00380	Tryptophan metabolism	2
ath00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi00040	Pentose and glucuronate interconversions	2
vvi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4
vvi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4
ghi00380	Tryptophan metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00380	Tryptophan metabolism	6
bna04075	Plant hormone signal transduction	6
bna00010	Glycolysis / Gluconeogenesis	6
bna01200	Carbon metabolism	6
bna00030	Pentose phosphate pathway	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	6
bna00380	Tryptophan metabolism	3
bna04075	Plant hormone signal transduction	3
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00380	Tryptophan metabolism	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00380	Tryptophan metabolism	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00380	Tryptophan metabolism	3
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00380	Tryptophan metabolism	2
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

101262607

101253797

102587670

107829568

107825960

107809685

828569

843393

100818522

103831591

100262049

100245885

100257504

112328448

7456901

11410630

11439449

107909692

106375778

106404922

102612766

4325198

4337930

100272716

100285505

100193435

123114279

123442807

8056556

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101262607 (sly-u.5 coexpression data)

Top 50 enrichment test to 101262607 (sly-u.5 coexpression data)


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	cre	bdi
Paralog	3	1	3	2	1	2	3	2	2	1	2	1	2	3	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101262607 (sly-u.5 coexpression data)

Top 50 enrichment test to 101262607 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**