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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   GH3-9   protein GRETCHEN HAGEN 3-9 
 sly-r.6   GH3-9   protein GRETCHEN HAGEN 3-9 
 sly-u.5   GH3-17   protein GRETCHEN HAGEN 3-17 
 sly-u.5   GH3-15   indole-3-acetic acid-amido synthetase GH3.6-like 
 sly-u.5   GH3-7   indole-3-acetic acid-amido synthetase GH3.6 
 sot-r.1   102602326   indole-3-acetic acid-amido synthetase GH3.6-like 
 sot-r.1   102584145   indole-3-acetic acid-amido synthetase GH3.6 
 nta-r.1   107760875   indole-3-acetic acid-amido synthetase GH3.6-like 
 nta-r.1   107770881   indole-3-acetic acid-amido synthetase GH3.6-like 
 ath-u.5   WES1   Auxin-responsive GH3 family protein 
 ath-u.5   DFL1   Auxin-responsive GH3 family protein 
 bra-r.6   103866974   indole-3-acetic acid-amido synthetase GH3.5 
 bra-r.6   103857039   indole-3-acetic acid-amido synthetase GH3.6 
 bra-r.6   103851955   indole-3-acetic acid-amido synthetase GH3.6 
 vvi-u.5   100250242   indole-3-acetic acid-amido synthetase GH3.6-like 
 ppo-u.5   7454392   indole-3-acetic acid-amido synthetase GH3.6 
 ppo-u.5   18095866   indole-3-acetic acid-amido synthetase GH3.6 
 mtr-u.5   25502673   indole-3-acetic acid-amido synthetase GH3.6 
 mtr-u.5   11407113   indole-3-acetic acid-amido synthetase GH3.6 
 ghi-r.1   107918077   indole-3-acetic acid-amido synthetase GH3.6 
 ghi-r.1   107886821   indole-3-acetic acid-amido synthetase GH3.6 
 ghi-r.1   107886917   indole-3-acetic acid-amido synthetase GH3.6 
 bna-r.1   111213957   indole-3-acetic acid-amido synthetase GH3.6 
 bna-r.1   125581541   indole-3-acetic acid-amido synthetase GH3.6 
 bna-r.1   106445777   indole-3-acetic acid-amido synthetase GH3.5 
 cit-r.1   102620266   indole-3-acetic acid-amido synthetase GH3.6 
 cit-r.1   102619770   indole-3-acetic acid-amido synthetase GH3.6-like 
 osa-u.5   4327043   probable indole-3-acetic acid-amido synthetase GH3.1 
 osa-u.5   4339234   probable indole-3-acetic acid-amido synthetase GH3.4 
 zma-u.5   103651132   probable indole-3-acetic acid-amido synthetase GH3.1 
 zma-u.5   100280297   uncharacterized LOC100280297 
 tae-r.2   123061448   probable indole-3-acetic acid-amido synthetase GH3.4 
 tae-r.2   123062270   probable indole-3-acetic acid-amido synthetase GH3.1 
 tae-r.2   123071030   probable indole-3-acetic acid-amido synthetase GH3.1 
 hvu-r.1   123443433   probable indole-3-acetic acid-amido synthetase GH3.4 
 hvu-r.1   123440343   probable indole-3-acetic acid-amido synthetase GH3.1 
 sbi-r.1   8080071   probable indole-3-acetic acid-amido synthetase GH3.4 
 sbi-r.1   8082370   probable indole-3-acetic acid-amido synthetase GH3.1 
 bdi-r.1   100841725   probable indole-3-acetic acid-amido synthetase GH3.4 
 bdi-r.1   100824783   probable indole-3-acetic acid-amido synthetase GH3.1 

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Top 50 coexpressed genes to GH3-9 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GH3-9 (sly-u.5 coexpression data)

CoexMap"101262636"


slyGH3-9 | Entrez gene ID : 101262636      
Species sly sot nta ath bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi gma cre
Paralog 5 2 2 2 3 1 2 2 3 3 2 2 2 3 2 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04075 [list] [network] Plant hormone signal transduction (437 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0010279 [list] [network] indole-3-acetic acid amido synthetase activity  (4 genes)  IEA  
Protein XP_004244168.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 1,  extr 1,  vacu 1  (predict for XP_004244168.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004244168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
GH3-9
sly-r.6
for
GH3-9
sly-u.5
for
GH3-17
sly-u.5
for
GH3-15
sly-u.5
for
GH3-7
sot-r.1
for
102602326
sot-r.1
for
102584145
nta-r.1
for
107760875
nta-r.1
for
107770881
ath-u.5
for
WES1
ath-u.5
for
DFL1
bra-r.6
for
103866974
bra-r.6
for
103857039
bra-r.6
for
103851955
vvi-u.5
for
100250242
ppo-u.5
for
7454392
ppo-u.5
for
18095866
mtr-u.5
for
25502673
mtr-u.5
for
11407113
ghi-r.1
for
107918077
ghi-r.1
for
107886821
ghi-r.1
for
107886917
bna-r.1
for
111213957
bna-r.1
for
125581541
bna-r.1
for
106445777
cit-r.1
for
102620266
cit-r.1
for
102619770
osa-u.5
for
4327043
osa-u.5
for
4339234
zma-u.5
for
103651132
zma-u.5
for
100280297
tae-r.2
for
123061448
tae-r.2
for
123062270
tae-r.2
for
123071030
hvu-r.1
for
123443433
hvu-r.1
for
123440343
sbi-r.1
for
8080071
sbi-r.1
for
8082370
bdi-r.1
for
100841725
bdi-r.1
for
100824783


Ortholog ID: 1515
Species sly sly sly sot sot nta nta ath ath gma bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol GH3-9 GH3-17 GH3-7 LOC102582830 LOC102580803 LOC107770881 LOC107796246 WES1 DFL1 LOC100801378 LOC103866974 LOC103857039 LOC103851955 LOC100250242 LOC7454392 LOC18095866 LOC25502673 LOC11407113 LOC107886917 LOC107916581 LOC107951774 LOC111213957 LOC106409348 LOC106346022 LOC102620266 LOC102619770 LOC4327043 LOC4339234 LOC103651132 LOC100280297 LOC123071030 LOC123138580 LOC123182515 LOC123443433 LOC123440343 LOC8080071 LOC8082370 LOC100841725 LOC100824783
Function* protein GRETCHEN HAGEN 3-9 protein GRETCHEN HAGEN 3-17 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6-like indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6-like indole-3-acetic acid-amido synthetase GH3.6-like Auxin-responsive GH3 family protein Auxin-responsive GH3 family protein indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.5 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6-like indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.5 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6 indole-3-acetic acid-amido synthetase GH3.6-like probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.1 uncharacterized LOC100280297 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.4 probable indole-3-acetic acid-amido synthetase GH3.1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly00040 Pentose and glucuronate interconversions 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 3
sot04626 Plant-pathogen interaction 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04136 Autophagy - other 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00910 Nitrogen metabolism 2
bra01200 Carbon metabolism 2
bra00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo04120 Ubiquitin mediated proteolysis 2
ppo00030 Pentose phosphate pathway 2
ppo01200 Carbon metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 9
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00062 Fatty acid elongation 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262636 101266841 101258198 102582830 102580803 107770881 107796246 828834 835539 100801378 103866974 103857039 103851955 100250242 7454392 18095866 25502673 11407113 107886917 107916581 107951774 111213957 106409348 106346022 102620266 102619770 4327043 4339234 103651132 100280297 123071030 123138580 123182515 123443433 123440343 8080071 8082370 100841725 100824783
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