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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263562   protein PHYTOCHROME KINASE SUBSTRATE 4 
 sly-r.6   101263562   protein PHYTOCHROME KINASE SUBSTRATE 4 
 sot-r.1   102601310   protein PHYTOCHROME KINASE SUBSTRATE 4 
 nta-r.1   107796286   protein PHYTOCHROME KINASE SUBSTRATE 4-like 
 nta-r.1   107784416   protein PHYTOCHROME KINASE SUBSTRATE 4-like 
 ath-u.5   PKS4   phytochrome kinase substrate 4 
 gma-u.5   100804863   protein PHYTOCHROME KINASE SUBSTRATE 4 
 gma-u.5   100775429   protein PHYTOCHROME KINASE SUBSTRATE 4 
 ppo-u.5   7456298   protein PHYTOCHROME KINASE SUBSTRATE 4 
 mtr-u.5   11436539   protein PHYTOCHROME KINASE SUBSTRATE 4 
 ghi-r.1   107959501   protein PHYTOCHROME KINASE SUBSTRATE 4 
 ghi-r.1   107943396   protein PHYTOCHROME KINASE SUBSTRATE 4 
 cit-r.1   102610598   protein PHYTOCHROME KINASE SUBSTRATE 4 
 osa-u.5   9267758   protein PHYTOCHROME KINASE SUBSTRATE 4 
 hvu-r.1   123439775   protein PHYTOCHROME KINASE SUBSTRATE 4 
 bdi-r.1   100821486   protein PHYTOCHROME KINASE SUBSTRATE 4 

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Top 50 coexpressed genes to 101263562 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263562 (sly-u.5 coexpression data)

CoexMap"101263562"


slyLOC101263562 | Entrez gene ID : 101263562      
Species sly sot nta ath gma ppo mtr ghi cit osa hvu bdi vvi tae cre zma sbi bra bna
Paralog 2 1 2 1 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009638 [list] [network] phototropism  (4 genes)  IEA  
GO CC
GO MF
Protein XP_004249767.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  pero 1,  cyto 1,  vacu 1  (predict for XP_004249767.2)
Subcellular
localization
TargetP
other 8  (predict for XP_004249767.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263562
sly-r.6
for
101263562
sot-r.1
for
102601310
nta-r.1
for
107796286
nta-r.1
for
107784416
ath-u.5
for
PKS4
gma-u.5
for
100804863
gma-u.5
for
100775429
ppo-u.5
for
7456298
mtr-u.5
for
11436539
ghi-r.1
for
107959501
ghi-r.1
for
107943396
cit-r.1
for
102610598
osa-u.5
for
9267758
hvu-r.1
for
123439775
bdi-r.1
for
100821486


Ortholog ID: 9070
Species sly sot nta nta ath gma gma ppo mtr ghi cit osa hvu bdi
Symbol LOC101263562 LOC102601310 LOC107796286 LOC107784416 PKS4 LOC100804863 LOC100775429 LOC7456298 LOC11436539 LOC107959501 LOC102610598 LOC9267758 LOC123439775 LOC100821486
Function* protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4-like protein PHYTOCHROME KINASE SUBSTRATE 4-like phytochrome kinase substrate 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4 protein PHYTOCHROME KINASE SUBSTRATE 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 6
sot04517 IgSF CAM signaling 6
sot04814 Motor proteins 6
sot00053 Ascorbate and aldarate metabolism 4
sot00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263562 102601310 107796286 107784416 830297 100804863 100775429 7456298 11436539 107959501 102610598 9267758 123439775 100821486
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