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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263654   uncharacterized LOC101263654 
 sly-r.6   101263654   uncharacterized LOC101263654 
 sly-m.5   101263654   uncharacterized LOC101263654 
 sot-r.1   102579313   translin 
 nta-r.1   107796099   uncharacterized LOC107796099 
 nta-r.1   107786765   uncharacterized LOC107786765 
 ath-u.5   AT2G37020   Translin family protein 
 gma-u.5   100811968   translin 
 bra-r.6   103857651   translin 
 vvi-u.5   100248220   uncharacterized LOC100248220 
 ppo-u.5   18100174   uncharacterized LOC18100174 
 mtr-u.5   11432950   translin 
 ghi-r.1   107899466   translin 
 ghi-r.1   107948371   translin 
 bna-r.1   106392603   translin-like 
 bna-r.1   106441056   translin-like 
 cit-r.1   102617697   uncharacterized LOC102617697 
 osa-u.5   4348736   uncharacterized LOC4348736 
 zma-u.5   100272490   translin 
 tae-r.2   123180940   translin 
 tae-r.2   123119281   translin 
 hvu-r.1   123429797   translin 
 sbi-r.1   8059310   translin 
 bdi-r.1   100842255   translin 

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Top 50 coexpressed genes to 101263654 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263654 (sly-u.5 coexpression data)

CoexMap"101263654"


slyLOC101263654 | Entrez gene ID : 101263654      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 1 1 1 1 1 2 2 1 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016070 [list] [network] RNA metabolic process  (1101 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (57 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (778 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004249627.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_004249627.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_004249627.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263654
sly-r.6
for
101263654
sly-m.5
for
101263654
sot-r.1
for
102579313
nta-r.1
for
107796099
nta-r.1
for
107786765
ath-u.5
for
AT2G37020
gma-u.5
for
100811968
bra-r.6
for
103857651
vvi-u.5
for
100248220
ppo-u.5
for
18100174
mtr-u.5
for
11432950
ghi-r.1
for
107899466
ghi-r.1
for
107948371
bna-r.1
for
106392603
bna-r.1
for
106441056
cit-r.1
for
102617697
osa-u.5
for
4348736
zma-u.5
for
100272490
tae-r.2
for
123180940
tae-r.2
for
123119281
hvu-r.1
for
123429797
sbi-r.1
for
8059310
bdi-r.1
for
100842255


Ortholog ID: 11665
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC101263654 LOC102579313 LOC107796099 LOC107786765 AT2G37020 LOC100811968 LOC103857651 LOC100248220 LOC18100174 LOC11432950 LOC107899466 LOC107948371 LOC106392603 LOC106441056 LOC102617697 LOC4348736 LOC100272490 LOC123180940 LOC123119281 LOC123429797 LOC8059310 LOC100842255
Function* uncharacterized LOC101263654 translin uncharacterized LOC107796099 uncharacterized LOC107786765 Translin family protein translin translin uncharacterized LOC100248220 uncharacterized LOC18100174 translin translin translin translin-like translin-like uncharacterized LOC102617697 uncharacterized LOC4348736 translin translin translin translin translin translin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
nta03010 Ribosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
nta03010 Ribosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 3
bra04626 Plant-pathogen interaction 3
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00220 Arginine biosynthesis 4
ppo00250 Alanine, aspartate and glutamate metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo01240 Biosynthesis of cofactors 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 6
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03010 Ribosome 3
cit00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263654 102579313 107796099 107786765 818276 100811968 103857651 100248220 18100174 11432950 107899466 107948371 106392603 106441056 102617697 4348736 100272490 123180940 123119281 123429797 8059310 100842255
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