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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265464   probable E3 ubiquitin-protein ligase RHC1A 
 sly-r.6   101265464   probable E3 ubiquitin-protein ligase RHC1A 
 sot-r.1   102583047   E3 ubiquitin-protein ligase RING1-like 
 nta-r.1   107768784   putative E3 ubiquitin-protein ligase RHC1A 

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Top 50 coexpressed genes to 101265464 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265464 (sly-u.5 coexpression data)

CoexMap"101265464"


slyLOC101265464 | Entrez gene ID : 101265464      
Species sly sot nta vvi bdi bna ppo sbi gma ghi cit hvu osa tae zma cre mtr ath bra
Paralog 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (334 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
Protein XP_004245969.1 [sequence] [blastp]
XP_010325606.1 [sequence] [blastp]
XP_010325607.1 [sequence] [blastp]
XP_010325608.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_004245969.1)
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_010325606.1)
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_010325607.1)
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_010325608.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_004245969.1)
chlo 5,  other 4  (predict for XP_010325606.1)
chlo 5,  other 4  (predict for XP_010325607.1)
chlo 5,  other 4  (predict for XP_010325608.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265464
sly-r.6
for
101265464
sot-r.1
for
102583047
nta-r.1
for
107768784


Ortholog ID: 28546
Species sly sot nta
Symbol LOC101265464 LOC102583047 LOC107768784
Function* probable E3 ubiquitin-protein ligase RHC1A E3 ubiquitin-protein ligase RING1-like putative E3 ubiquitin-protein ligase RHC1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265464 102583047 107768784
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