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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265542   F-box protein At1g70590 
 sly-r.6   101265542   F-box protein At1g70590 
 sly-u.5   101252015   F-box protein At1g70590-like 
 sot-r.1   102591124   F-box protein At1g70590-like 
 sot-r.1   102584979   F-box protein At1g70590-like 
 nta-r.1   107819654   F-box protein At1g70590-like 
 nta-r.1   107801666   F-box protein At1g70590 
 nta-r.1   107767982   F-box protein At1g70590 
 ath-u.5   AT1G70590   F-box family protein 
 gma-u.5   100781817   F-box protein At1g70590 
 gma-u.5   100780397   F-box protein At1g70590 
 bra-r.6   103831594   F-box protein At1g70590 
 vvi-u.5   100244366   F-box protein At1g70590 
 ppo-u.5   7492382   F-box protein At1g70590 
 mtr-u.5   11407076   F-box protein At1g70590 
 ghi-r.1   107921108   F-box protein At1g70590 
 ghi-r.1   107959921   F-box protein At1g70590 
 ghi-r.1   107916809   F-box protein At1g70590 
 bna-r.1   106405626   F-box protein At1g70590 
 bna-r.1   106406825   F-box protein At1g70590 
 cit-r.1   102611305   F-box protein At1g70590 
 osa-u.5   4336152   F-box protein At1g70590 
 zma-u.5   103637020   F-box protein At1g70590 
 zma-u.5   100383612   uncharacterized LOC100383612 
 tae-r.2   123189517   F-box protein At1g70590 
 tae-r.2   123053624   F-box protein At1g70590 
 tae-r.2   123045746   F-box protein At1g70590 
 hvu-r.1   123426998   F-box protein At1g70590 
 sbi-r.1   8073578   F-box protein At1g70590 
 bdi-r.1   100841291   F-box protein At1g70590 

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Top 50 coexpressed genes to 101265542 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265542 (sly-u.5 coexpression data)

CoexMap"101265542"


slyLOC101265542 | Entrez gene ID : 101265542      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 1 2 1 1 1 1 3 2 1 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004239122.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_004239122.2)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_004239122.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265542
sly-r.6
for
101265542
sly-u.5
for
101252015
sot-r.1
for
102591124
sot-r.1
for
102584979
nta-r.1
for
107819654
nta-r.1
for
107801666
nta-r.1
for
107767982
ath-u.5
for
AT1G70590
gma-u.5
for
100781817
gma-u.5
for
100780397
bra-r.6
for
103831594
vvi-u.5
for
100244366
ppo-u.5
for
7492382
mtr-u.5
for
11407076
ghi-r.1
for
107921108
ghi-r.1
for
107959921
ghi-r.1
for
107916809
bna-r.1
for
106405626
bna-r.1
for
106406825
cit-r.1
for
102611305
osa-u.5
for
4336152
zma-u.5
for
103637020
zma-u.5
for
100383612
tae-r.2
for
123189517
tae-r.2
for
123053624
tae-r.2
for
123045746
hvu-r.1
for
123426998
sbi-r.1
for
8073578
bdi-r.1
for
100841291


Ortholog ID: 6745
Species sly sly sot sot nta nta nta ath gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit osa zma zma tae tae tae hvu sbi bdi
Symbol LOC101265542 LOC101252015 LOC102591124 LOC102584979 LOC107819654 LOC107801666 LOC107767982 AT1G70590 LOC100781817 LOC100780397 LOC103831594 LOC100244366 LOC7492382 LOC11407076 LOC107921108 LOC107959921 LOC107916809 LOC106405626 LOC106406825 LOC102611305 LOC4336152 LOC103637020 LOC100383612 LOC123189517 LOC123053624 LOC123045746 LOC123426998 LOC8073578 LOC100841291
Function* F-box protein At1g70590 F-box protein At1g70590-like F-box protein At1g70590-like F-box protein At1g70590-like F-box protein At1g70590-like F-box protein At1g70590 F-box protein At1g70590 F-box family protein F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 uncharacterized LOC100383612 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590 F-box protein At1g70590
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 2
mtr00620 Pyruvate metabolism 2
mtr00640 Propanoate metabolism 2
mtr01212 Fatty acid metabolism 2
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
cit00190 Oxidative phosphorylation 2
cit04145 Phagosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03015 mRNA surveillance pathway 2
sbi00561 Glycerolipid metabolism 2
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265542 101252015 102591124 102584979 107819654 107801666 107767982 843396 100781817 100780397 103831594 100244366 7492382 11407076 107921108 107959921 107916809 106405626 106406825 102611305 4336152 103637020 100383612 123189517 123053624 123045746 123426998 8073578 100841291
The preparation time of this page was 1.3 [sec].