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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265686   thioredoxin-like protein YLS8 
 sly-r.6   101265686   thioredoxin-like protein YLS8 
 sly-m.5   101265686   thioredoxin-like protein YLS8 
 sly-u.5   101263601   thioredoxin-like protein YLS8 
 ath-u.5   YLS8   mRNA splicing factor, thioredoxin-like U5 snRNP 
 gma-u.5   DIM1   DIM 1-like protein 
 gma-u.5   100792141   thioredoxin-like protein YLS8 
 vvi-u.5   100249310   thioredoxin-like protein YLS8 
 ppo-u.5   7456307   thioredoxin-like protein YLS8 
 mtr-u.5   11433035   thioredoxin-like protein YLS8 
 mtr-u.5   11421211   thioredoxin-like protein YLS8 
 mtr-u.5   11441608   thioredoxin-like protein YLS8 
 osa-u.5   4348949   thioredoxin-like protein YLS8 
 osa-u.5   9268087   thioredoxin-like protein YLS8 
 zma-u.5   100282486   uncharacterized LOC100282486 

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Top 50 coexpressed genes to 101265686 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265686 (sly-u.5 coexpression data)

CoexMap"101265686"


slyLOC101265686 | Entrez gene ID : 101265686    
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 1 1 3 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03040 [list] [network] Spliceosome (385 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (162 genes)  IEA  
GO CC
GO:0005682 [list] [network] U5 snRNP  (17 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (26 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (144 genes)  IEA  
GO MF
Protein XP_004231501.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 4,  nucl 1,  extr 1,  golg 1  (predict for XP_004231501.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for XP_004231501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265686
sly-r.6
for
101265686
sly-m.5
for
101265686
sly-u.5
for
101263601
ath-u.5
for
YLS8
gma-u.5
for
DIM1
gma-u.5
for
100792141
vvi-u.5
for
100249310
ppo-u.5
for
7456307
mtr-u.5
for
11433035
mtr-u.5
for
11421211
mtr-u.5
for
11441608
osa-u.5
for
4348949
osa-u.5
for
9268087
zma-u.5
for
100282486


Ortholog ID: 3970
Species sly sly sot sot nta nta ath gma bra vvi ppo mtr mtr ghi ghi bna bna cit osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101265686 LOC101263601 LOC102594936 LOC102586499 LOC107814973 LOC107819142 YLS8 LOC100792141 LOC103847147 LOC100249310 LOC7456307 LOC11421211 LOC11433035 LOC107944993 LOC107944944 LOC106419259 LOC106385071 LOC102629695 LOC4348949 LOC9268087 LOC100282486 LOC123182593 LOC123091008 LOC123447468 LOC123431930 LOC8075607 LOC8065492 LOC100837645 LOC100841012 CHLRE_01g055416v5
Function* thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 mRNA splicing factor, thioredoxin-like U5 snRNP thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 uncharacterized LOC100282486 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 thioredoxin-like protein YLS8 U5 snRNP protein, DIM1 family
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 5
ath04141 Protein processing in endoplasmic reticulum 3
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma00190 Oxidative phosphorylation 4
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo04144 Endocytosis 4
ppo04145 Phagosome 3
ppo04148 Efferocytosis 3
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 9
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03040 Spliceosome 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna04144 Endocytosis 4
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04144 Endocytosis 3
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae04016 MAPK signaling pathway - plant 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04144 Endocytosis 2
hvu03040 Spliceosome 2
hvu03083 Polycomb repressive complex 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi04120 Ubiquitin mediated proteolysis 4
bdi03083 Polycomb repressive complex 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265686 101263601 102594936 102586499 107814973 107819142 830725 100792141 103847147 100249310 7456307 11421211 11433035 107944993 107944944 106419259 106385071 102629695 4348949 9268087 100282486 123182593 123091008 123447468 123431930 8075607 8065492 100837645 100841012 5725783
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