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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265739   large ribosomal subunit protein uL22z 
 sly-r.6   101265739   large ribosomal subunit protein uL22z 
 sly-m.5   101265739   large ribosomal subunit protein uL22z 
 sly-u.5   101264811   large ribosomal subunit protein uL22y 
 sot-r.1   102580731   60S ribosomal protein L17-1-like 
 sot-r.1   102580390   60S ribosomal protein L17-1-like 
 sot-r.1   102577682   ribosomal protein PETRP-like 
 nta-r.1   107767990   large ribosomal subunit protein uL22z-like 
 nta-r.1   107790705   large ribosomal subunit protein uL22y 
 nta-r.1   107817504   large ribosomal subunit protein uL22z 
 ath-u.5   AT1G27400   Ribosomal protein L22p/L17e family protein 
 ath-u.5   AT1G67430   Ribosomal protein L22p/L17e family protein 
 gma-u.5   100305777   60S ribosomal protein L17 
 gma-u.5   100816536   60S ribosomal protein L17-2 
 gma-u.5   100800781   60S ribosomal protein L17 
 bra-r.6   103829063   60S ribosomal protein L17-2 
 bra-r.6   103839039   60S ribosomal protein L17-1 
 bra-r.6   103831171   60S ribosomal protein L17-2 
 vvi-u.5   100262608   large ribosomal subunit protein uL22y 
 vvi-u.5   100257483   large ribosomal subunit protein uL22y 
 vvi-u.5   100242281   large ribosomal subunit protein uL22y 
 ppo-u.5   7494771   60S ribosomal protein L17-2 
 ppo-u.5   7463121   60S ribosomal protein L17-2 
 ppo-u.5   7477021   60S ribosomal protein L17-2 
 mtr-u.5   25501741   60S ribosomal protein L17-1 
 mtr-u.5   11427020   60S ribosomal protein L17-2 
 ghi-r.1   107898629   60S ribosomal protein L17-2 
 ghi-r.1   107916629   60S ribosomal protein L17-2 
 ghi-r.1   107920995   60S ribosomal protein L17-2 
 bna-r.1   125588629   60S ribosomal protein L17-2-like 
 bna-r.1   106425384   60S ribosomal protein L17-1-like 
 bna-r.1   106410829   60S ribosomal protein L17-2 
 cit-r.1   102628450   60S ribosomal protein L17-2 
 osa-u.5   4346540   large ribosomal subunit protein uL22 
 osa-u.5   4346123   large ribosomal subunit protein uL22 
 zma-u.5   100280639   60S ribosomal protein L17 
 zma-u.5   100194089   60S ribosomal protein L17 
 zma-u.5   541667   ribosomal protein L17 
 tae-r.2   123103375   60S ribosomal protein L17-1 
 tae-r.2   123120900   60S ribosomal protein L17-1 
 tae-r.2   123111568   60S ribosomal protein L17-1 
 hvu-r.1   123407658   60S ribosomal protein L17-2 
 hvu-r.1   123452940   60S ribosomal protein L17-1 
 sbi-r.1   8060895   60S ribosomal protein L17 
 sbi-r.1   8065928   60S ribosomal protein L17 
 sbi-r.1   8060894   60S ribosomal protein L17 
 bdi-r.1   100842261   60S ribosomal protein L17-2 
 bdi-r.1   100843393   60S ribosomal protein L17-1 
 cre-r.1   CHLRE_13g568900v5   ribosomal protein L17 

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Top 50 coexpressed genes to 101265739 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265739 (sly-u.5 coexpression data)

CoexMap"101265739"


slyLOC101265739 | Entrez gene ID : 101265739      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 3 3 3 2 3 3 1 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0002181 [list] [network] cytoplasmic translation  (74 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
Protein XP_004241536.1 [sequence] [blastp]
XP_069154907.1 [sequence] [blastp]
XP_069154908.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cyto 1  (predict for XP_004241536.1)
nucl 6,  mito 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_069154907.1)
nucl 6,  mito 2,  cyto 1  (predict for XP_069154908.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_004241536.1)
other 6,  chlo 3  (predict for XP_069154907.1)
other 7,  chlo 4  (predict for XP_069154908.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265739
sly-r.6
for
101265739
sly-m.5
for
101265739
sly-u.5
for
101264811
sot-r.1
for
102580731
sot-r.1
for
102580390
sot-r.1
for
102577682
nta-r.1
for
107767990
nta-r.1
for
107790705
nta-r.1
for
107817504
ath-u.5
for
AT1G27400
ath-u.5
for
AT1G67430
gma-u.5
for
100305777
gma-u.5
for
100816536
gma-u.5
for
100800781
bra-r.6
for
103829063
bra-r.6
for
103839039
bra-r.6
for
103831171
vvi-u.5
for
100262608
vvi-u.5
for
100257483
vvi-u.5
for
100242281
ppo-u.5
for
7494771
ppo-u.5
for
7463121
ppo-u.5
for
7477021
mtr-u.5
for
25501741
mtr-u.5
for
11427020
ghi-r.1
for
107898629
ghi-r.1
for
107916629
ghi-r.1
for
107920995
bna-r.1
for
125588629
bna-r.1
for
106425384
bna-r.1
for
106410829
cit-r.1
for
102628450
osa-u.5
for
4346540
osa-u.5
for
4346123
zma-u.5
for
100280639
zma-u.5
for
100194089
zma-u.5
for
541667
tae-r.2
for
123103375
tae-r.2
for
123120900
tae-r.2
for
123111568
hvu-r.1
for
123407658
hvu-r.1
for
123452940
sbi-r.1
for
8060895
sbi-r.1
for
8065928
sbi-r.1
for
8060894
bdi-r.1
for
100842261
bdi-r.1
for
100843393
cre-r.1
for
CHLRE_13g568900v5


Ortholog ID: 1683
Species sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC101265739 LOC101264811 LOC102580731 LOC102580390 LOC102577682 LOC107817504 LOC107832403 LOC107832413 AT1G27400 AT1G67430 LOC100305777 LOC100800781 LOC100499784 LOC103829063 LOC103839039 LOC103835398 LOC100262608 LOC100257483 LOC100242281 LOC7494771 LOC7477021 LOC7484470 LOC25501741 LOC11427020 LOC107898629 LOC107931470 LOC107898628 LOC106425384 LOC106353938 LOC106392065 LOC102628450 LOC4346540 LOC4346123 LOC100280639 LOC100194089 LOC100272465 LOC123120900 LOC123151755 LOC123156995 LOC123407658 LOC123452940 LOC8060895 LOC8065928 LOC8060894 LOC100842261 LOC100843393 CHLRE_13g568900v5
Function* large ribosomal subunit protein uL22z large ribosomal subunit protein uL22y 60S ribosomal protein L17-1-like 60S ribosomal protein L17-1-like ribosomal protein PETRP-like large ribosomal subunit protein uL22z large ribosomal subunit protein uL22z large ribosomal subunit protein uL22z Ribosomal protein L22p/L17e family protein Ribosomal protein L22p/L17e family protein 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1 60S ribosomal protein L17-1 large ribosomal subunit protein uL22y large ribosomal subunit protein uL22y large ribosomal subunit protein uL22y 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1-like 60S ribosomal protein L17-2-like 60S ribosomal protein L17-2 60S ribosomal protein L17-2 large ribosomal subunit protein uL22 large ribosomal subunit protein uL22 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-1 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-2 60S ribosomal protein L17-1 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17 60S ribosomal protein L17-2 60S ribosomal protein L17-1 ribosomal protein L17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly00053 Ascorbate and aldarate metabolism 2
sly00562 Inositol phosphate metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma01240 Biosynthesis of cofactors 3
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265739 101264811 102580731 102580390 102577682 107817504 107832403 107832413 839630 843063 100305777 100800781 100499784 103829063 103839039 103835398 100262608 100257483 100242281 7494771 7477021 7484470 25501741 11427020 107898629 107931470 107898628 106425384 106353938 106392065 102628450 4346540 4346123 100280639 100194089 100272465 123120900 123151755 123156995 123407658 123452940 8060895 8065928 8060894 100842261 100843393 5719099
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