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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265804   branched-chain amino acid aminotransferase 2, chloroplastic-like 
 sly-r.6   101265804   branched-chain amino acid aminotransferase 2, chloroplastic-like 
 sly-m.5   101265804   branched-chain amino acid aminotransferase 2, chloroplastic-like 
 sly-u.5   101254608   branched-chain-amino-acid aminotransferase 2, chloroplastic-like 
 sly-u.5   101253875   branched-chain-amino-acid aminotransferase 2, chloroplastic 
 ath-u.5   BCAT4   branched-chain aminotransferase4 
 ath-u.5   AT1G50110   D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein 
 gma-u.5   100778177   putative branched-chain-amino-acid aminotransferase 7 
 gma-u.5   100798328   branched-chain-amino-acid aminotransferase 5, chloroplastic-like 
 vvi-u.5   100853545   branched-chain amino acid aminotransferase 2, chloroplastic 
 vvi-u.5   100260903   branched-chain-amino-acid aminotransferase 2, chloroplastic 
 ppo-u.5   7467241   branched-chain-amino-acid aminotransferase 2, chloroplastic 
 mtr-u.5   11410393   branched-chain-amino-acid aminotransferase 6 
 mtr-u.5   11434910   branched-chain amino acid aminotransferase 2, chloroplastic 
 osa-u.5   4331322   branched-chain amino acid aminotransferase 2, chloroplastic 
 osa-u.5   4332151   branched-chain-amino-acid aminotransferase 5, chloroplastic 
 zma-u.5   100283367   branched-chain-amino-acid aminotransferase 
 zma-u.5   100191754   uncharacterized LOC100191754 
 zma-u.5   100281255   branched-chain-amino-acid aminotransferase 

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Top 50 coexpressed genes to 101265804 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265804 (sly-u.5 coexpression data)

CoexMap"101265804"


slyLOC101265804 | Entrez gene ID : 101265804      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 2 2 2 1 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00270 [list] [network] Cysteine and methionine metabolism (118 genes)
sly00280 [list] [network] Valine, leucine and isoleucine degradation (67 genes)
sly00290 [list] [network] Valine, leucine and isoleucine biosynthesis (26 genes)
sly00770 [list] [network] Pantothenate and CoA biosynthesis (42 genes)
sly00966 [list] [network] Glucosinolate biosynthesis (9 genes)
sly01210 [list] [network] 2-Oxocarboxylic acid metabolism (89 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
sly01240 [list] [network] Biosynthesis of cofactors (247 genes)
GO BP
GO:0009081 [list] [network] branched-chain amino acid metabolic process  (56 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
GO:0004084 [list] [network] branched-chain-amino-acid transaminase activity  (6 genes)  IEA  
Protein XP_004234645.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 2  (predict for XP_004234645.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_004234645.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265804

.
sly-r.6
for
101265804

.
sly-m.5
for
101265804

.
sly-u.5
for
101254608

.
sly-u.5
for
101253875

.
ath-u.5
for
BCAT4

.
ath-u.5
for
AT1G50110

.
gma-u.5
for
100778177

.
gma-u.5
for
100798328

.
vvi-u.5
for
100853545

.
vvi-u.5
for
100260903

.
ppo-u.5
for
7467241

.
mtr-u.5
for
11410393

.
mtr-u.5
for
11434910

.
osa-u.5
for
4331322

.
osa-u.5
for
4332151

.
zma-u.5
for
100283367

.
zma-u.5
for
100191754

.
zma-u.5
for
100281255

.


Ortholog ID: 564
Species ath ath gma sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol BCAT4 BCAT3 LOC100782644 LOC101251085 LOC4336645 LOC4331322 LOC100191754 LOC100281255 LOC103873035 LOC103871787 LOC100260903 LOC100853545 LOC7465551 LOC25490006 LOC11434910 LOC123106048 LOC123181598 LOC123430668 LOC123449947 LOC107922272 LOC107898986 LOC106360576 LOC106350617 CHLRE_05g245900v5 LOC110435962 LOC8064642 LOC102591763 LOC102628935 LOC102614611 LOC100829265 LOC100839637 LOC107824411 LOC107774243
Function* branched-chain aminotransferase4 branched-chain aminotransferase 3 branched-chain-amino-acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 5, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic uncharacterized LOC100191754 branched-chain-amino-acid aminotransferase branched-chain-amino-acid aminotransferase 3, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic-like branched-chain amino acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 6 branched-chain amino acid aminotransferase 2, chloroplastic branched-chain-amino-acid aminotransferase 3, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic uncharacterized protein branched-chain-amino-acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 5, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 2, chloroplastic-like branched-chain-amino-acid aminotransferase 2, chloroplastic branched-chain-amino-acid aminotransferase 5, chloroplastic branched-chain-amino-acid aminotransferase 3, chloroplastic branched-chain amino acid aminotransferase 2, chloroplastic branched-chain-amino-acid aminotransferase 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 11
ath01210 2-Oxocarboxylic acid metabolism 11
ath00290 Valine, leucine and isoleucine biosynthesis 4
ath00270 Cysteine and methionine metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 11
ath01230 Biosynthesis of amino acids 9
ath00966 Glucosinolate biosynthesis 8
ath00270 Cysteine and methionine metabolism 7
ath00290 Valine, leucine and isoleucine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 4
gma01210 2-Oxocarboxylic acid metabolism 3
gma00270 Cysteine and methionine metabolism 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00860 Porphyrin metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 8
zma00970 Aminoacyl-tRNA biosynthesis 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma01200 Carbon metabolism 3
zma00270 Cysteine and methionine metabolism 3
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra01230 Biosynthesis of amino acids 7
bra00010 Glycolysis / Gluconeogenesis 5
bra00710 Carbon fixation by Calvin cycle 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00350 Tyrosine metabolism 3
bra00360 Phenylalanine metabolism 3
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00280 Valine, leucine and isoleucine degradation 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00290 Valine, leucine and isoleucine biosynthesis 5
ppo01230 Biosynthesis of amino acids 5
ppo00770 Pantothenate and CoA biosynthesis 4
ppo01210 2-Oxocarboxylic acid metabolism 4
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00460 Cyanoamino acid metabolism 2
mtr00500 Starch and sucrose metabolism 2
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00640 Propanoate metabolism 2
mtr00785 Lipoic acid metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae00966 Glucosinolate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00290 Valine, leucine and isoleucine biosynthesis 6
tae00770 Pantothenate and CoA biosynthesis 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00190 Oxidative phosphorylation 2
hvu04145 Phagosome 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 3
ghi00280 Valine, leucine and isoleucine degradation 3
ghi00290 Valine, leucine and isoleucine biosynthesis 3
ghi00770 Pantothenate and CoA biosynthesis 3
ghi00966 Glucosinolate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 14
ghi00290 Valine, leucine and isoleucine biosynthesis 12
ghi01210 2-Oxocarboxylic acid metabolism 12
ghi00770 Pantothenate and CoA biosynthesis 8
ghi00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna00280 Valine, leucine and isoleucine degradation 4
bna00290 Valine, leucine and isoleucine biosynthesis 4
bna00770 Pantothenate and CoA biosynthesis 4
bna00966 Glucosinolate biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 8
bna00280 Valine, leucine and isoleucine degradation 8
bna00290 Valine, leucine and isoleucine biosynthesis 8
bna00770 Pantothenate and CoA biosynthesis 8
bna00966 Glucosinolate biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 6
cre01240 Biosynthesis of cofactors 4
cre00290 Valine, leucine and isoleucine biosynthesis 3
cre01210 2-Oxocarboxylic acid metabolism 3
cre00340 Histidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 3
sbi01210 2-Oxocarboxylic acid metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi00640 Propanoate metabolism 2
sbi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 5
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi00640 Propanoate metabolism 2
bdi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 3
nta00190 Oxidative phosphorylation 2
nta00270 Cysteine and methionine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00270 Cysteine and methionine metabolism 3
nta00280 Valine, leucine and isoleucine degradation 3
nta00290 Valine, leucine and isoleucine biosynthesis 3
nta00770 Pantothenate and CoA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821508 824130 100782644 101251085 4336645 4331322 100191754 100281255 103873035 103871787 100260903 100853545 7465551 25490006 11434910 123106048 123181598 123430668 123449947 107922272 107898986 106360576 106350617 5726478 110435962 8064642 102591763 102628935 102614611 100829265 100839637 107824411 107774243
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