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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101266952   large ribosomal subunit protein bL17c 
 sly-r.6   101266952   large ribosomal subunit protein bL17c 
 sly-m.5   101266952   large ribosomal subunit protein bL17c 
 sly-u.5   101267247   large ribosomal subunit protein bL17c 
 ath-u.5   AT3G54210   Ribosomal protein L17 family protein 
 gma-u.5   100779016   50S ribosomal protein L17, chloroplastic 
 gma-u.5   100500099   uncharacterized LOC100500099 
 vvi-u.5   100263106   large ribosomal subunit protein bL17c 
 ppo-u.5   18100043   50S ribosomal protein L17, chloroplastic 
 ppo-u.5   7472504   50S ribosomal protein L17, chloroplastic 
 mtr-u.5   25489166   50S ribosomal protein L17, chloroplastic 
 osa-u.5   4334555   large ribosomal subunit protein bL17c 
 zma-u.5   100274150   50S ribosomal protein L17, chloroplastic-like 

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Top 50 coexpressed genes to 101266952 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101266952 (sly-u.5 coexpression data)

CoexMap"101266952"


slyLOC101266952 | Entrez gene ID : 101266952      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
Protein XP_004242470.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_004242470.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004242470.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101266952

.
sly-r.6
for
101266952

.
sly-m.5
for
101266952

.
sly-u.5
for
101267247

.
ath-u.5
for
AT3G54210

.
gma-u.5
for
100779016

.
gma-u.5
for
100500099

.
vvi-u.5
for
100263106

.
ppo-u.5
for
18100043

.
ppo-u.5
for
7472504

.
mtr-u.5
for
25489166

.
osa-u.5
for
4334555

.
zma-u.5
for
100274150

.


Ortholog ID: 6584
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G54210 LOC100779016 LOC100500099 LOC101266952 LOC101267247 LOC4334555 LOC100274150 LOC103841337 LOC103829970 LOC100263106 LOC18100043 LOC7472504 LOC25489166 LOC123105607 LOC123113926 LOC123452954 LOC107938672 LOC107909039 LOC106353683 LOC106353684 CHLRE_02g108850v5 LOC8057389 LOC102586267 LOC102586592 LOC102623176 LOC100843749 LOC107821645 LOC107771075
Function* Ribosomal protein L17 family protein 50S ribosomal protein L17, chloroplastic uncharacterized LOC100500099 large ribosomal subunit protein bL17c large ribosomal subunit protein bL17c large ribosomal subunit protein bL17c 50S ribosomal protein L17, chloroplastic-like 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic large ribosomal subunit protein bL17c 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic-like uncharacterized protein 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic-like 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic 50S ribosomal protein L17, chloroplastic large ribosomal subunit protein bL17c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824588 100779016 100500099 101266952 101267247 4334555 100274150 103841337 103829970 100263106 18100043 7472504 25489166 123105607 123113926 123452954 107938672 107909039 106353683 106353684 5725269 8057389 102586267 102586592 102623176 100843749 107821645 107771075
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