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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   SWI3B   SWI/SNF complex subunit SWI3B 
 sly-r.6   SWI3B   SWI/SNF complex subunit SWI3B 
 ath-u.5   SWI3B   switch subunit 3 
 gma-u.5   100783679   SWI/SNF complex subunit SWI3B 
 gma-u.5   100779777   SWI/SNF complex subunit SWI3B 
 vvi-u.5   100258194   SWI/SNF complex subunit SWI3B 
 ppo-u.5   7471744   SWI/SNF complex subunit SWI3B 
 mtr-u.5   11429703   SWI/SNF complex subunit SWI3B 
 mtr-u.5   11417237   SWI/SNF complex subunit SWI3B 
 osa-u.5   4328597   SWI/SNF complex subunit SWI3B 
 zma-u.5   100273414   uncharacterized LOC100273414 

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Top 50 coexpressed genes to SWI3B (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SWI3B (sly-u.5 coexpression data)

CoexMap"101268100"


slySWI3B | Entrez gene ID : 101268100      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03082 [list] [network] ATP-dependent chromatin remodeling (70 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein NP_001362572.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001362572.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_001362572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
SWI3B
sly-r.6
for
SWI3B
ath-u.5
for
SWI3B
gma-u.5
for
100783679
gma-u.5
for
100779777
vvi-u.5
for
100258194
ppo-u.5
for
7471744
mtr-u.5
for
11429703
mtr-u.5
for
11417237
osa-u.5
for
4328597
zma-u.5
for
100273414


Ortholog ID: 10692
Species sly sot nta ath gma gma bra vvi ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol SWI3B LOC102584029 LOC107824220 SWI3B LOC100779777 LOC100783679 LOC103865284 LOC100258194 LOC7471744 LOC11429703 LOC11417237 LOC107905711 LOC107905748 LOC125608282 LOC106448827 LOC102607635 LOC4328597 LOC100273414 LOC123144252 LOC123136761 LOC123401929 LOC8082888 LOC100821616
Function* SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B switch subunit 3 SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B-like SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B uncharacterized LOC100273414 SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B SWI/SNF complex subunit SWI3B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo04144 Endocytosis 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03040 Spliceosome 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101268100 102584029 107824220 817927 100779777 100783679 103865284 100258194 7471744 11429703 11417237 107905711 107905748 125608282 106448827 102607635 4328597 100273414 123144252 123136761 123401929 8082888 100821616
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