ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101268389	uncharacterized LOC101268389
sly-r.6	101268389	uncharacterized LOC101268389
sly-u.5	101254375	uncharacterized LOC101254375
sly-u.5	101250180	uncharacterized LOC101250180
sot-r.1	102584459	uncharacterized LOC102584459
sot-r.1	PPS5	uncharacterized LOC102585287
sot-r.1	102599981	IST1 homolog
nta-r.1	107778212	uncharacterized LOC107778212
nta-r.1	107781822	uncharacterized LOC107781822
nta-r.1	107782735	uncharacterized LOC107782735
ath-u.5	AT4G35730	Regulator of Vps4 activity in the MVB pathway protein
ath-u.5	AT1G25420	Regulator of Vps4 activity in the MVB pathway protein
ath-u.5	AT1G34220	Regulator of Vps4 activity in the MVB pathway protein
gma-u.5	100820205	IST1 homolog
gma-u.5	100816410	IST1-like protein
gma-u.5	100814824	IST1 homolog
bra-r.6	103874176	uncharacterized LOC103874176
bra-r.6	103829153	IST1 homolog
bra-r.6	103833603	uncharacterized LOC103833603
vvi-u.5	100853848	uncharacterized LOC100853848
vvi-u.5	100261039	uncharacterized LOC100261039
vvi-u.5	100245921	uncharacterized LOC100245921
ppo-u.5	18104500	uncharacterized LOC18104500
ppo-u.5	7483956	uncharacterized LOC7483956
ppo-u.5	18101063	uncharacterized LOC18101063
mtr-u.5	25496184	uncharacterized LOC25496184
mtr-u.5	11424648	IST1 homolog
mtr-u.5	11445341	IST1-like protein
ghi-r.1	107895515	IST1-like protein
ghi-r.1	107914061	uncharacterized LOC107914061
ghi-r.1	107947820	IST1 homolog
bna-r.1	106361283	uncharacterized LOC106361283
bna-r.1	106346514	uncharacterized LOC106346514
bna-r.1	106367562	IST1-like protein
cit-r.1	102611062	uncharacterized LOC102611062
cit-r.1	102619557	uncharacterized LOC102619557
cit-r.1	102622709	uncharacterized LOC102622709
osa-u.5	4327935	uncharacterized LOC4327935
osa-u.5	4344788	IST1-like protein
osa-u.5	4347767	uncharacterized LOC4347767
zma-u.5	100273933	uncharacterized LOC100273933
zma-u.5	100272774	uncharacterized LOC100272774
tae-r.2	123061840	IST1-like protein
tae-r.2	123104707	uncharacterized LOC123104707
tae-r.2	123072241	IST1 homolog
hvu-r.1	123445370	IST1 homolog
hvu-r.1	123451833	uncharacterized LOC123451833
hvu-r.1	123444145	IST1-like protein
sbi-r.1	110437053	IST1-like protein
sbi-r.1	8064444	uncharacterized LOC8064444
sbi-r.1	8076192	IST1-like protein
bdi-r.1	100823111	uncharacterized LOC100823111
bdi-r.1	100845901	IST1-like protein
bdi-r.1	100821522	IST1-like protein
cre-r.1	CHLRE_10g435400v5	uncharacterized protein

Top 50 coexpressed genes to 101268389 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101268389 (sly-u.5 coexpression data)

CoexMap"101268389"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0015031 [list] [network] protein transport

(364 genes)

IEA

GO CC

GO MF

Protein

XP_004237874.1 [sequence] [blastp]
XP_069153419.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo 3, nucl 1, cyto 1, cysk 1, nucl_plas 1	(predict for XP_004237874.1)
mito 4, chlo 3, nucl 1, cyto 1, cysk 1, nucl_plas 1	(predict for XP_069153419.1)

Subcellular
localization
TargetP

other 6	(predict for XP_004237874.1)
other 6	(predict for XP_069153419.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101268389	sly-r.6 for 101268389	sly-u.5 for 101254375	sly-u.5 for 101250180	sot-r.1 for 102584459	sot-r.1 for PPS5	sot-r.1 for 102599981	nta-r.1 for 107778212	nta-r.1 for 107781822	nta-r.1 for 107782735	ath-u.5 for AT4G35730	ath-u.5 for AT1G25420	ath-u.5 for AT1G34220	gma-u.5 for 100820205	gma-u.5 for 100816410	gma-u.5 for 100814824	bra-r.6 for 103874176	bra-r.6 for 103829153	bra-r.6 for 103833603	vvi-u.5 for 100853848	vvi-u.5 for 100261039	vvi-u.5 for 100245921	ppo-u.5 for 18104500	ppo-u.5 for 7483956	ppo-u.5 for 18101063	mtr-u.5 for 25496184	mtr-u.5 for 11424648	mtr-u.5 for 11445341	ghi-r.1 for 107895515	ghi-r.1 for 107914061	ghi-r.1 for 107947820	bna-r.1 for 106361283	bna-r.1 for 106346514	bna-r.1 for 106367562	cit-r.1 for 102611062	cit-r.1 for 102619557	cit-r.1 for 102622709	osa-u.5 for 4327935	osa-u.5 for 4344788	osa-u.5 for 4347767	zma-u.5 for 100273933	zma-u.5 for 100272774	tae-r.2 for 123061840	tae-r.2 for 123104707	tae-r.2 for 123072241	hvu-r.1 for 123445370	hvu-r.1 for 123451833	hvu-r.1 for 123444145	sbi-r.1 for 110437053	sbi-r.1 for 8064444	sbi-r.1 for 8076192	bdi-r.1 for 100823111	bdi-r.1 for 100845901	bdi-r.1 for 100821522	cre-r.1 for CHLRE_10g435400v5

Ortholog

Ortholog ID: 1285

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PPS5

Function^*

uncharacterized LOC101268389

uncharacterized LOC101254375

uncharacterized LOC101250180

uncharacterized LOC102584459

uncharacterized LOC102585287

IST1 homolog

uncharacterized LOC107782735

uncharacterized LOC107828576

uncharacterized LOC107764592

Regulator of Vps4 activity in the MVB pathway protein

IST1-like protein

uncharacterized LOC100805899

uncharacterized LOC103874176

uncharacterized LOC103833603

uncharacterized LOC103834941

uncharacterized LOC100853848

uncharacterized LOC100261039

uncharacterized LOC100245921

uncharacterized LOC7483956

uncharacterized LOC18101063

uncharacterized LOC7475817

uncharacterized LOC25496184

IST1 homolog

IST1-like protein

IST1 homolog

IST1-like protein

uncharacterized LOC102611062

uncharacterized LOC102619557

uncharacterized LOC102622709

uncharacterized LOC4327935

IST1-like protein

uncharacterized LOC4347767

uncharacterized LOC100273933

uncharacterized LOC100191296

IST1-like protein

IST1 homolog

uncharacterized LOC123112985

IST1 homolog

IST1-like protein

uncharacterized LOC8064444

IST1-like protein

uncharacterized LOC100823111

IST1-like protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	7
sly04120	Ubiquitin mediated proteolysis	3
sly00510	N-Glycan biosynthesis	2
sly00513	Various types of N-glycan biosynthesis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta00240	Pyrimidine metabolism	2
nta00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00620	Pyruvate metabolism	3
ath01200	Carbon metabolism	3
ath00010	Glycolysis / Gluconeogenesis	2
ath00020	Citrate cycle (TCA cycle)	2
ath00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3
ppo04145	Phagosome	3
ppo04144	Endocytosis	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	3
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	5
ghi00071	Fatty acid degradation	3
ghi00592	alpha-Linolenic acid metabolism	2
ghi01040	Biosynthesis of unsaturated fatty acids	2
ghi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	6
ghi00513	Various types of N-glycan biosynthesis	6
ghi04141	Protein processing in endoplasmic reticulum	6
ghi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2
bna04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	4
cit03250	Viral life cycle - HIV-1	2
cit03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04626	Plant-pathogen interaction	3
tae03250	Viral life cycle - HIV-1	2
tae03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04148	Efferocytosis	2
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	5
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

101268389

101254375

101250180

102584459

102585287

102599981

107782735

107828576

107764592

829726

839128

840321

100816410

100781075

100805899

103874176

103833603

103834941

100853848

100261039

100245921

7483956

18101063

7475817

25496184

11424648

11445341

107947820

107959555

107886646

106411784

106436614

102611062

102619557

102622709

4327935

4344788

4347767

100273933

100191296

123078942

123080485

123112985

123445370

123444145

8064444

8076192

110434093

100823111

100845901

100821522

5716064

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	3	2	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101268389 (sly-u.5 coexpression data)

Top 50 enrichment test to 101268389 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**