ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	TRM6/7/8b	TONNEAU1 recruiting motif 6/7/8b
sly-r.6	TRM6/7/8b	TONNEAU1 recruiting motif 6/7/8b
sly-u.5	TRM6/7/8a	TONNEAU1 recruiting motif 6/7/8a
sot-r.1	102606116	uncharacterized LOC102606116
sot-r.1	102600562	uncharacterized LOC102600562
sot-r.1	107063036	uncharacterized LOC107063036
nta-r.1	107766215	uncharacterized LOC107766215
nta-r.1	107829109	uncharacterized LOC107829109
nta-r.1	107804222	uncharacterized LOC107804222
ath-u.5	TRM6	serine-rich adhesin for platelets-like protein
ath-u.5	TRM7	GPI-anchored adhesin-like protein
ath-u.5	TRM8	GPI-anchored adhesin-like protein
gma-u.5	100797988	uncharacterized LOC100797988
gma-u.5	100804688	uncharacterized LOC100804688
gma-u.5	100804990	uncharacterized LOC100804990
bra-r.6	103854687	uncharacterized LOC103854687
bra-r.6	103830177	uncharacterized LOC103830177
bra-r.6	103870803	uncharacterized LOC103870803
vvi-u.5	100256774	uncharacterized LOC100256774
vvi-u.5	100264914	uncharacterized LOC100264914
ppo-u.5	7481704	uncharacterized LOC7481704
ppo-u.5	7483896	uncharacterized LOC7483896
mtr-u.5	11420047	uncharacterized LOC11420047
mtr-u.5	25499647	uncharacterized LOC25499647
ghi-r.1	107927279	uncharacterized LOC107927279
ghi-r.1	107920622	uncharacterized LOC107920622
ghi-r.1	107896638	uncharacterized LOC107896638
bna-r.1	125609122	uncharacterized LOC125609122
bna-r.1	125574909	uncharacterized LOC125574909
bna-r.1	106353177	uncharacterized LOC106353177
cit-r.1	102628873	uncharacterized LOC102628873
cit-r.1	102616179	uncharacterized LOC102616179
osa-u.5	4334672	uncharacterized LOC4334672
osa-u.5	4332585	probable GPI-anchored adhesin-like protein PGA55
zma-u.5	100193341	DUF4378 domain protein
zma-u.5	100193394	DUF4378 domain protein
zma-u.5	103651877	uncharacterized LOC103651877
tae-r.2	123114116	uncharacterized LOC123114116
tae-r.2	123123602	uncharacterized LOC123123602
tae-r.2	123087812	uncharacterized LOC123087812
hvu-r.1	123453174	uncharacterized LOC123453174
hvu-r.1	123453173	uncharacterized LOC123453173
sbi-r.1	8080196	uncharacterized LOC8080196
bdi-r.1	100823037	uncharacterized LOC100823037
bdi-r.1	100832303	serine-rich adhesin for platelets

Top 50 coexpressed genes to TRM6/7/8b (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to TRM6/7/8b (sly-u.5 coexpression data)

CoexMap"101268805"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_010313418.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_010313418.1)

Subcellular
localization
TargetP

other 7

(predict for XP_010313418.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for TRM6/7/8b	sly-r.6 for TRM6/7/8b	sly-u.5 for TRM6/7/8a	sot-r.1 for 102606116	sot-r.1 for 102600562	sot-r.1 for 107063036	nta-r.1 for 107766215	nta-r.1 for 107829109	nta-r.1 for 107804222	ath-u.5 for TRM6	ath-u.5 for TRM7	ath-u.5 for TRM8	gma-u.5 for 100797988	gma-u.5 for 100804688	gma-u.5 for 100804990	bra-r.6 for 103854687	bra-r.6 for 103830177	bra-r.6 for 103870803	vvi-u.5 for 100256774	vvi-u.5 for 100264914	ppo-u.5 for 7481704	ppo-u.5 for 7483896	mtr-u.5 for 11420047	mtr-u.5 for 25499647	ghi-r.1 for 107927279	ghi-r.1 for 107920622	ghi-r.1 for 107896638	bna-r.1 for 125609122	bna-r.1 for 125574909	bna-r.1 for 106353177	cit-r.1 for 102628873	cit-r.1 for 102616179	osa-u.5 for 4334672	osa-u.5 for 4332585	zma-u.5 for 100193341	zma-u.5 for 100193394	zma-u.5 for 103651877	tae-r.2 for 123114116	tae-r.2 for 123123602	tae-r.2 for 123087812	hvu-r.1 for 123453174	hvu-r.1 for 123453173	sbi-r.1 for 8080196	bdi-r.1 for 100823037	bdi-r.1 for 100832303

Ortholog

Ortholog ID: 1798

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

TRM6

TRM7

TRM8

Function^*

TONNEAU1 recruiting motif 6/7/8b

TONNEAU1 recruiting motif 6/7/8a

uncharacterized LOC102606116

uncharacterized LOC102600562

uncharacterized LOC107063036

uncharacterized LOC107766215

uncharacterized LOC107829109

uncharacterized LOC107804222

serine-rich adhesin for platelets-like protein

GPI-anchored adhesin-like protein

uncharacterized LOC100797988

uncharacterized LOC100804688

uncharacterized LOC100804990

uncharacterized LOC103854687

uncharacterized LOC103830177

uncharacterized LOC103870803

uncharacterized LOC100256774

uncharacterized LOC100264914

uncharacterized LOC7481704

uncharacterized LOC7489412

uncharacterized LOC11420047

uncharacterized LOC25499647

uncharacterized LOC107896638

uncharacterized LOC107888942

uncharacterized LOC107893621

uncharacterized LOC106353177

uncharacterized LOC106428200

uncharacterized LOC102628873

uncharacterized LOC102616179

uncharacterized LOC4334672

probable GPI-anchored adhesin-like protein PGA55

DUF4378 domain protein

uncharacterized LOC103651877

uncharacterized LOC103625735

uncharacterized LOC123114116

uncharacterized LOC123123602

uncharacterized LOC123114115

uncharacterized LOC123453174

uncharacterized LOC123453173

uncharacterized LOC8080196

uncharacterized LOC100823037

serine-rich adhesin for platelets

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly04142	Lysosome	3
sly05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	4
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	4
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	2
bra00290	Valine, leucine and isoleucine biosynthesis	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	4
bna04016	MAPK signaling pathway - plant	2
bna00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	5
bna00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	4
cit04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4
tae03030	DNA replication	4
tae00270	Cysteine and methionine metabolism	3
tae03410	Base excision repair	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4
tae04814	Motor proteins	2
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	3
hvu03008	Ribosome biogenesis in eukaryotes	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4

Expression

Expression pattern

Entrez Gene ID^*

101268805

101265765

102606116

102600562

107063036

107766215

107829109

107804222

819744

825034

832749

100797988

100804688

100804990

103854687

103830177

103870803

100256774

100264914

7481704

7489412

11420047

25499647

107896638

107888942

107893621

106353177

106428200

102628873

102616179

4334672

4332585

100193341

103651877

103625735

123114116

123123602

123114115

123453174

123453173

8080196

100823037

100832303

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	3	3	3	2	2	2	3	3	2	2	3	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to TRM6/7/8b (sly-u.5 coexpression data)

Top 50 enrichment test to TRM6/7/8b (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**