ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102578738	uncharacterized LOC102578738
sly-u.5	101253483	uncharacterized LOC101253483
nta-r.1	107781281	uncharacterized LOC107781281
nta-r.1	107786676	uncharacterized LOC107786676
ath-u.5	AT2G29180	uncharacterized protein
gma-u.5	100815636	uncharacterized LOC100815636
gma-u.5	100792546	uncharacterized LOC100792546
bra-r.6	103855266	uncharacterized LOC103855266
vvi-u.5	100248460	uncharacterized LOC100248460
ppo-u.5	7465097	uncharacterized LOC7465097
mtr-u.5	11434147	uncharacterized LOC11434147
mtr-u.5	11427773	uncharacterized LOC11427773
ghi-r.1	107942402	uncharacterized LOC107942402
ghi-r.1	107954099	uncharacterized LOC107954099
bna-r.1	106382845	uncharacterized LOC106382845
bna-r.1	BNAA02G34470D	uncharacterized BNAA02G34470D
cit-r.1	102629508	hypothetical protein
osa-u.5	4332392	uncharacterized LOC4332392
zma-u.5	109939611	uncharacterized LOC109939611
zma-u.5	103631928	uncharacterized LOC103631928
tae-r.2	123097922	uncharacterized LOC123097922
sbi-r.1	8081515	uncharacterized LOC8081515
bdi-r.1	106866111	uncharacterized LOC106866111

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009535 [list] [network] chloroplast thylakoid membrane

(97 genes)

IEA

GO MF

Protein

XP_006344139.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_006344139.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_006344139.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102578738	sly-u.5 for 101253483	nta-r.1 for 107781281	nta-r.1 for 107786676	ath-u.5 for AT2G29180	gma-u.5 for 100815636	gma-u.5 for 100792546	bra-r.6 for 103855266	vvi-u.5 for 100248460	ppo-u.5 for 7465097	mtr-u.5 for 11434147	mtr-u.5 for 11427773	ghi-r.1 for 107942402	ghi-r.1 for 107954099	bna-r.1 for 106382845	bna-r.1 for BNAA02G34470D	cit-r.1 for 102629508	osa-u.5 for 4332392	zma-u.5 for 109939611	zma-u.5 for 103631928	tae-r.2 for 123097922	sbi-r.1 for 8081515	bdi-r.1 for 106866111

Ortholog

Ortholog ID: 11252

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

sbi

bdi

Symbol

Function^*

uncharacterized LOC102578738

uncharacterized LOC101253483

uncharacterized LOC107781281

uncharacterized LOC107786676

uncharacterized protein

uncharacterized LOC100815636

uncharacterized LOC100792546

uncharacterized LOC103855266

uncharacterized LOC100248460

uncharacterized LOC7465097

uncharacterized LOC11434147

uncharacterized LOC11427773

uncharacterized LOC107942402

uncharacterized LOC107954099

uncharacterized LOC106382845

uncharacterized BNAA02G34470D

hypothetical protein

uncharacterized LOC4332392

uncharacterized LOC109939611

uncharacterized LOC103631928

uncharacterized LOC123097922

uncharacterized LOC8081515

uncharacterized LOC106866111

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	5
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	4
nta03018	RNA degradation	2
nta00230	Purine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	12
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	7
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	10
osa00860	Porphyrin metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	8
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
bdi01240	Biosynthesis of cofactors	3
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

102578738

101253483

107781281

107786676

817467

100815636

100792546

103855266

100248460

7465097

11434147

11427773

107942402

107954099

106382845

106382887

102629508

4332392

109939611

103631928

123097922

8081515

106866111

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102578738 (sot-r.1 coexpression data)

Top 50 enrichment test to 102578738 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	sbi	bdi	cre	hvu
Paralog	1	1	2	1	2	1	1	1	2	2	2	1	1	2	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102578738 (sot-r.1 coexpression data)

Top 50 enrichment test to 102578738 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**