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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102581428   photosystem II reaction center W protein, chloroplastic 
 sly-u.5   101245583   photosystem II reaction center W protein, chloroplastic 
 sly-u.5   101257676   photosystem II reaction center W protein, chloroplastic 
 ath-u.5   PSBW   photosystem II reaction center W 
 gma-u.5   100306223   uncharacterized LOC100306223 
 gma-u.5   100499815   uncharacterized LOC100499815 
 gma-u.5   100526966   uncharacterized LOC100526966 
 vvi-u.5   100265702   photosystem II reaction center W protein, chloroplastic 
 vvi-u.5   100256361   photosystem II reaction center W protein, chloroplastic 
 ppo-u.5   7476887   photosystem II reaction center W protein, chloroplastic 
 ppo-u.5   7479997   photosystem II reaction center W protein, chloroplastic 
 mtr-u.5   25499202   photosystem II reaction center W protein, chloroplastic 
 mtr-u.5   25484344   photosystem II reaction center W protein, chloroplastic 
 osa-u.5   4339270   photosystem II reaction center W protein, chloroplastic-like 
 osa-u.5   4327150   photosystem II reaction center W protein, chloroplastic-like 
 zma-u.5   100283835   uncharacterized LOC100283835 
 zma-u.5   100283816   uncharacterized LOC100283816 

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Top 50 coexpressed genes to 102581428 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102581428 (sot-r.1 coexpression data)

CoexMap"102581428"


sotLOC102581428 | Entrez gene ID : 102581428      
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 2 1 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00195 [list] [network] Photosynthesis (86 genes)
GO BP
GO:0042549 [list] [network] photosystem II stabilization  (4 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009523 [list] [network] photosystem II  (31 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (97 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (606 genes)  IEA  
GO MF
Protein XP_006349749.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_006349749.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006349749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102581428

.
sly-u.5
for
101245583

.
sly-u.5
for
101257676

.
ath-u.5
for
PSBW

.
gma-u.5
for
100306223

.
gma-u.5
for
100499815

.
gma-u.5
for
100526966

.
vvi-u.5
for
100265702

.
vvi-u.5
for
100256361

.
ppo-u.5
for
7476887

.
ppo-u.5
for
7479997

.
mtr-u.5
for
25499202

.
mtr-u.5
for
25484344

.
osa-u.5
for
4339270

.
osa-u.5
for
4327150

.
zma-u.5
for
100283835

.
zma-u.5
for
100283816

.


Ortholog ID: 3311
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PSBW LOC100306223 LOC100499815 LOC101245583 LOC101257676 LOC4339270 LOC4327150 LOC100283816 LOC100283835 LOC103867946 LOC103844007 LOC100256361 LOC100265702 LOC7476887 LOC7479997 LOC25484344 LOC25499202 LOC123172465 LOC123079341 LOC123444546 LOC123447707 LOC107955464 LOC106426387 LOC106415703 LOC8072144 LOC8080091 LOC102590010 LOC102581428 LOC102610209 LOC102629478 LOC100845994 LOC100846816 LOC107802496 LOC107825362
Function* photosystem II reaction center W uncharacterized LOC100306223 uncharacterized LOC100499815 photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic-like photosystem II reaction center W protein, chloroplastic-like uncharacterized LOC100283816 uncharacterized LOC100283835 photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic-like photosystem II reaction center W protein, chloroplastic-like photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic-like photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic-like photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic photosystem II reaction center W protein, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 12
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 14
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 16
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 15
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 4
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra00670 One carbon pool by folate 2
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 10
vvi00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 15
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 13
ppo00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 7
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
tae00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 9
hvu00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 5
hvu01200 Carbon metabolism 5
hvu00195 Photosynthesis 3
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 8
ghi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 12
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 10
sbi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 15
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 12
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 7
cit00710 Carbon fixation by Calvin cycle 4
cit01200 Carbon metabolism 4
cit00010 Glycolysis / Gluconeogenesis 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 11
bdi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 15
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 15
nta00196 Photosynthesis - antenna proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817606 100306223 100499815 101245583 101257676 4339270 4327150 100283816 100283835 103867946 103844007 100256361 100265702 7476887 7479997 25484344 25499202 123172465 123079341 123444546 123447707 107955464 106426387 106415703 8072144 8080091 102590010 102581428 102610209 102629478 100845994 100846816 107802496 107825362
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