Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102581920   F-box/LRR-repeat protein 25-like 
 sot-r.1   102589234   F-box protein At5g03100-like 
 sot-r.1   102586175   uncharacterized LOC102586175 
 sot-r.1   102583885   uncharacterized LOC102583885 
 sly-u.5   101264552   F-box protein At5g03100 
 sly-u.5   101263861   putative F-box protein At1g49610 
 sly-u.5   101259278   F-box/LRR-repeat protein At3g03360-like 
 nta-r.1   107814028   F-box protein At5g03100-like 
 nta-r.1   107816952   F-box protein At5g03100-like 
 nta-r.1   107815848   putative F-box protein At1g49610 
 ath-u.5   AT3G03360   F-box/RNI-like superfamily protein 
 bra-r.6   103830762   F-box protein At5g03100 
 bra-r.6   103869790   F-box/LRR-repeat protein At3g03360 
 vvi-u.5   100244825   putative F-box protein At1g49610 
 vvi-u.5   100854693   F-box protein At5g03100 
 ppo-u.5   7461634   F-box protein At5g03100 
 ppo-u.5   7464708   F-box/LRR-repeat protein At3g26922 
 ghi-r.1   107922878   F-box/LRR-repeat protein At3g03360 
 ghi-r.1   107938211   F-box/LRR-repeat protein At3g03360 

close


Top 50 coexpressed genes to 102581920 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102581920 (sot-r.1 coexpression data)

CoexMap"102581920"


sotLOC102581920 | Entrez gene ID : 102581920    
Species sot sly nta ath bra vvi ppo ghi gma zma cre sbi cit tae mtr osa hvu bna bdi
Paralog 4 3 3 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006361256.1 [sequence] [blastp]
XP_006361257.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 1,  mito 1,  chlo 1,  vacu 1,  pero 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_006361256.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_006361257.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006361256.1)
other 6  (predict for XP_006361257.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102581920
sot-r.1
for
102589234
sot-r.1
for
102586175
sot-r.1
for
102583885
sly-u.5
for
101264552
sly-u.5
for
101263861
sly-u.5
for
101259278
nta-r.1
for
107814028
nta-r.1
for
107816952
nta-r.1
for
107815848
ath-u.5
for
AT3G03360
bra-r.6
for
103830762
bra-r.6
for
103869790
vvi-u.5
for
100244825
vvi-u.5
for
100854693
ppo-u.5
for
7461634
ppo-u.5
for
7464708
ghi-r.1
for
107922878
ghi-r.1
for
107938211


Ortholog ID: 300
Species sot sly nta nta nta ath ath ath bra vvi vvi ppo ppo ghi ghi bna
Symbol LOC107061512 LOC101259278 LOC107806468 LOC107806466 LOC107806464 AT3G03360 AT5G03100 AT5G02910 LOC103869790 LOC100244825 LOC100854693 LOC7461634 LOC7464708 LOC107922878 LOC107938211 LOC106372612
Function* uncharacterized LOC107061512 F-box/LRR-repeat protein At3g03360-like F-box protein At5g03100 F-box protein At5g03100 uncharacterized LOC107806464 F-box/RNI-like superfamily protein F-box/RNI-like superfamily protein F-box/RNI-like superfamily protein F-box/LRR-repeat protein At3g03360 putative F-box protein At1g49610 F-box protein At5g03100 F-box protein At5g03100 F-box/LRR-repeat protein At3g26922 F-box/LRR-repeat protein At3g03360 F-box/LRR-repeat protein At3g03360 F-box/LRR-repeat protein At5g02910-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
nta03018 RNA degradation 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107061512 101259278 107806468 107806466 107806464 821272 831808 831746 103869790 100244825 100854693 7461634 7464708 107922878 107938211 106372612
The preparation time of this page was 0.1 [sec].