ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102582373	uncharacterized LOC102582373
sot-r.1	102605157	uncharacterized LOC102605157
sot-r.1	102601407	uncharacterized LOC102601407
sot-r.1	102595281	uncharacterized LOC102595281
sly-u.5	101257351	uncharacterized LOC101257351
sly-u.5	101254996	uncharacterized LOC101254996
sly-u.5	101257942	uncharacterized LOC101257942
nta-r.1	107762383	uncharacterized LOC107762383
nta-r.1	107762641	uncharacterized LOC107762641
nta-r.1	107766568	uncharacterized LOC107766568
ath-u.5	AT3G02555	uncharacterized protein
ath-u.5	AT5G16110	uncharacterized protein
ath-u.5	AT1G13390	translocase subunit seca
gma-u.5	100305585	uncharacterized LOC100305585
gma-u.5	100306293	uncharacterized LOC100306293
bra-r.6	103871934	uncharacterized LOC103871934
bra-r.6	103836106	uncharacterized LOC103836106
vvi-u.5	100262793	uncharacterized LOC100262793
vvi-u.5	100266248	uncharacterized LOC100266248
vvi-u.5	100251510	uncharacterized LOC100251510
ppo-u.5	18099495	uncharacterized LOC18099495
ppo-u.5	7487073	uncharacterized LOC7487073
ppo-u.5	7475634	uncharacterized LOC7475634
mtr-u.5	11406559	uncharacterized LOC11406559
mtr-u.5	11422535	uncharacterized LOC11422535
ghi-r.1	107916677	uncharacterized LOC107916677
ghi-r.1	107952824	uncharacterized LOC107952824
ghi-r.1	107942923	uncharacterized LOC107942923
bna-r.1	125610183	uncharacterized LOC125610183
bna-r.1	106441493	uncharacterized LOC106441493
bna-r.1	125606965	uncharacterized LOC125606965
cit-r.1	102618664	hypothetical protein
cit-r.1	102627691	uncharacterized LOC102627691
osa-u.5	9271366	uncharacterized LOC9271366
zma-u.5	103633253	uncharacterized LOC103633253
zma-u.5	103650465	uncharacterized LOC103650465
tae-r.2	123110490	uncharacterized LOC123110490
tae-r.2	123119488	SH3 domain-containing protein C23A1.17
tae-r.2	123102309	uncharacterized LOC123102309
hvu-r.1	123451922	unconventional myosin-XVI-like
sbi-r.1	8076644	translation initiation factor IF-2
bdi-r.1	100843912	uncharacterized LOC100843912

Top 50 coexpressed genes to 102582373 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102582373 (sot-r.1 coexpression data)

CoexMap"102582373"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001275050.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 2, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1

(predict for NP_001275050.1)

Subcellular
localization
TargetP

other 4

(predict for NP_001275050.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102582373	sot-r.1 for 102605157	sot-r.1 for 102601407	sot-r.1 for 102595281	sly-u.5 for 101257351	sly-u.5 for 101254996	sly-u.5 for 101257942	nta-r.1 for 107762383	nta-r.1 for 107762641	nta-r.1 for 107766568	ath-u.5 for AT3G02555	ath-u.5 for AT5G16110	ath-u.5 for AT1G13390	gma-u.5 for 100305585	gma-u.5 for 100306293	bra-r.6 for 103871934	bra-r.6 for 103836106	vvi-u.5 for 100262793	vvi-u.5 for 100266248	vvi-u.5 for 100251510	ppo-u.5 for 18099495	ppo-u.5 for 7487073	ppo-u.5 for 7475634	mtr-u.5 for 11406559	mtr-u.5 for 11422535	ghi-r.1 for 107916677	ghi-r.1 for 107952824	ghi-r.1 for 107942923	bna-r.1 for 125610183	bna-r.1 for 106441493	bna-r.1 for 125606965	cit-r.1 for 102618664	cit-r.1 for 102627691	osa-u.5 for 9271366	zma-u.5 for 103633253	zma-u.5 for 103650465	tae-r.2 for 123110490	tae-r.2 for 123119488	tae-r.2 for 123102309	hvu-r.1 for 123451922	sbi-r.1 for 8076644	bdi-r.1 for 100843912

Ortholog

Ortholog ID: 620

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102582373

uncharacterized LOC102605157

uncharacterized LOC102582300

uncharacterized LOC101254996

uncharacterized LOC101258832

uncharacterized LOC101263203

uncharacterized LOC107766568

uncharacterized LOC107799347

uncharacterized LOC107816458

uncharacterized protein

translocase subunit seca

uncharacterized LOC100306293

uncharacterized LOC100776729

uncharacterized LOC100788286

uncharacterized LOC103843361

uncharacterized LOC103856181

uncharacterized LOC103858969

uncharacterized LOC100262793

uncharacterized LOC100266248

uncharacterized LOC100251510

uncharacterized LOC18099495

uncharacterized LOC7487073

uncharacterized LOC7488359

uncharacterized LOC11422535

uncharacterized LOC11426069

uncharacterized LOC25485491

uncharacterized LOC107942923

uncharacterized LOC107912729

uncharacterized LOC107886636

uncharacterized LOC125601543

uncharacterized LOC106397192

uncharacterized LOC106364420

hypothetical protein

uncharacterized LOC102627691

uncharacterized LOC9271366

uncharacterized LOC103633253

uncharacterized LOC103650465

uncharacterized LOC123110490

SH3 domain-containing protein C23A1.17

uncharacterized LOC123102309

unconventional myosin-XVI-like

translation initiation factor IF-2

uncharacterized LOC100843912

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5
bdi04145	Phagosome	3
bdi04142	Lysosome	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102582373

102605157

102582300

101254996

101258832

101263203

107766568

107799347

107816458

820627

837899

843178

100306293

100776729

100788286

103843361

103856181

103858969

100262793

100266248

100251510

18099495

7487073

7488359

11422535

11426069

25485491

107942923

107912729

107886636

125601543

106397192

106364420

102618664

102627691

9271366

103633253

103650465

123110490

123119488

123102309

123451922

8076644

100843912

The preparation time of this page was 0.1 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	2	3	3	2	3	3	2	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102582373 (sot-r.1 coexpression data)

Top 50 enrichment test to 102582373 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**