Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102582858   pentatricopeptide repeat-containing protein At2g13600-like 
 gma-u.5   102666224   pentatricopeptide repeat-containing protein At2g21090 
 mtr-u.5   11429490   pentatricopeptide repeat-containing protein At2g21090 
 osa-u.5   4329654   pentatricopeptide repeat-containing protein At2g22070 
 zma-u.5   100382300   uncharacterized LOC100382300 

close


Top 50 coexpressed genes to 102582858 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102582858 (sot-r.1 coexpression data)

CoexMap"102582858"


sotLOC102582858 | Entrez gene ID : 102582858    
Species sot gma mtr osa zma ppo hvu vvi tae nta bra cit ghi bna bdi sly ath sbi cre
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015164382.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  E.R. 1,  nucl 1,  mito 1,  plas 1,  vacu 1,  nucl_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_015164382.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_015164382.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102582858

.
gma-u.5
for
102666224

.
mtr-u.5
for
11429490

.
osa-u.5
for
4329654

.
zma-u.5
for
100382300

.


Ortholog ID: 12999
Species gma osa zma mtr hvu ghi sot nta nta
Symbol LOC102666224 LOC4329654 LOC100382300 LOC11429490 LOC123395381 LOC107888537 LOC102582858 LOC107789106 LOC107806159
Function* pentatricopeptide repeat-containing protein At2g21090 pentatricopeptide repeat-containing protein At2g22070 uncharacterized LOC100382300 pentatricopeptide repeat-containing protein At2g21090 pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600 pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g13600-like pentatricopeptide repeat-containing protein At2g21090-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102666224 4329654 100382300 11429490 123395381 107888537 102582858 107789106 107806159
The preparation time of this page was 0.2 [sec].