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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102585140   small nuclear ribonucleoprotein-associated protein B'-like 
 sot-r.1   102591714   small nuclear ribonucleoprotein-associated proteins B and B'-like 
 sly-u.5   101262959   uncharacterized LOC101262959 
 nta-r.1   107825164   uncharacterized LOC107825164 
 nta-r.1   107793822   uncharacterized LOC107793822 
 ath-u.5   smB   small nuclear ribonucleoprotein associated protein B 
 ath-u.5   AT5G44500   Small nuclear ribonucleoprotein family protein 
 gma-u.5   100780500   small nuclear ribonucleoprotein-associated protein B 
 gma-u.5   100786807   small nuclear ribonucleoprotein-associated protein B 
 bra-r.6   103834168   small nuclear ribonucleoprotein-associated protein B' 
 vvi-u.5   100257709   small nuclear ribonucleoprotein-associated protein B'-like 
 ppo-u.5   18095770   uncharacterized LOC18095770 
 mtr-u.5   25501710   small nuclear ribonucleoprotein-associated protein B' 
 mtr-u.5   11431976   small nuclear ribonucleoprotein-associated protein B 
 ghi-r.1   107930376   small nuclear ribonucleoprotein-associated proteins B and B' 
 ghi-r.1   107925138   small nuclear ribonucleoprotein-associated protein B 
 bna-r.1   125580662   small nuclear ribonucleoprotein-associated proteins B and B'-like 
 bna-r.1   106442603   small nuclear ribonucleoprotein-associated protein B'-like 
 bna-r.1   106421059   small nuclear ribonucleoprotein-associated protein B'-like 
 cit-r.1   102630807   uncharacterized LOC102630807 
 osa-u.5   9270807   uncharacterized LOC9270807 
 zma-u.5   100282140   small nuclear ribonucleoprotein-associated protein B 
 zma-u.5   100272538   small nuclear ribonucleoprotein-associated protein B 
 tae-r.2   123045027   small nuclear ribonucleoprotein-associated protein B' 
 tae-r.2   123052809   small nuclear ribonucleoprotein-associated protein B' 
 tae-r.2   123188677   small nuclear ribonucleoprotein-associated protein B' 
 hvu-r.1   123426167   small nuclear ribonucleoprotein-associated protein B'-like 
 sbi-r.1   8081170   small nuclear ribonucleoprotein-associated protein N 
 bdi-r.1   106865937   small nuclear ribonucleoprotein-associated protein B' 
 cre-r.1   CHLRE_14g611150v5   uncharacterized protein 

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Top 50 coexpressed genes to 102585140 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102585140 (sot-r.1 coexpression data)

CoexMap"102585140"


sotLOC102585140 | Entrez gene ID : 102585140      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 2 2 1 1 1 2 2 3 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (151 genes)  IEA  
GO CC
GO:0005687 [list] [network] U4 snRNP  (6 genes)  IEA  
GO:0005682 [list] [network] U5 snRNP  (13 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (14 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (14 genes)  IEA  
GO:0005685 [list] [network] U1 snRNP  (15 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (24 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (54 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
GO:0070990 [list] [network] snRNP binding  (2 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006345588.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cyto 1,  mito 1,  plas 1,  extr 1,  mito_plas 1,  cyto_plas 1  (predict for XP_006345588.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_006345588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102585140
sot-r.1
for
102591714
sly-u.5
for
101262959
nta-r.1
for
107825164
nta-r.1
for
107793822
ath-u.5
for
smB
ath-u.5
for
AT5G44500
gma-u.5
for
100780500
gma-u.5
for
100786807
bra-r.6
for
103834168
vvi-u.5
for
100257709
ppo-u.5
for
18095770
mtr-u.5
for
25501710
mtr-u.5
for
11431976
ghi-r.1
for
107930376
ghi-r.1
for
107925138
bna-r.1
for
125580662
bna-r.1
for
106442603
bna-r.1
for
106421059
cit-r.1
for
102630807
osa-u.5
for
9270807
zma-u.5
for
100282140
zma-u.5
for
100272538
tae-r.2
for
123045027
tae-r.2
for
123052809
tae-r.2
for
123188677
hvu-r.1
for
123426167
sbi-r.1
for
8081170
bdi-r.1
for
106865937
cre-r.1
for
CHLRE_14g611150v5


Ortholog ID: 5799
Species sot sot sly nta nta ath ath gma gma bra vvi ppo mtr mtr ghi ghi bna bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC102585140 LOC102591714 LOC101262959 LOC107825164 LOC107793822 smB AT5G44500 LOC100780500 LOC100786807 LOC103834168 LOC100257709 LOC18095770 LOC25501710 LOC11431976 LOC107930376 LOC107925138 LOC106421059 LOC106366990 LOC125590046 LOC102630807 LOC9270807 LOC100282140 LOC100272538 LOC123045027 LOC123052809 LOC123188677 LOC123426167 LOC8081170 LOC106865937 CHLRE_14g611150v5
Function* small nuclear ribonucleoprotein-associated protein B'-like small nuclear ribonucleoprotein-associated proteins B and B'-like uncharacterized LOC101262959 uncharacterized LOC107825164 uncharacterized LOC107793822 small nuclear ribonucleoprotein associated protein B Small nuclear ribonucleoprotein family protein small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B'-like uncharacterized LOC18095770 small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated proteins B and B' small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated protein B'-like small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B'-like uncharacterized LOC102630807 uncharacterized LOC9270807 small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated protein B small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B' small nuclear ribonucleoprotein-associated protein B'-like small nuclear ribonucleoprotein-associated protein N small nuclear ribonucleoprotein-associated protein B' uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03013 Nucleocytoplasmic transport 5
sot03040 Spliceosome 2
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04141 Protein processing in endoplasmic reticulum 3
sot03013 Nucleocytoplasmic transport 2
sot03060 Protein export 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03013 Nucleocytoplasmic transport 5
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03010 Ribosome 5
ath03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi00510 N-Glycan biosynthesis 2
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr03040 Spliceosome 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03015 mRNA surveillance pathway 2
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03040 Spliceosome 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03040 Spliceosome 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03040 Spliceosome 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102585140 102591714 101262959 107825164 107793822 827792 834477 100780500 100786807 103834168 100257709 18095770 25501710 11431976 107930376 107925138 106421059 106366990 125590046 102630807 9270807 100282140 100272538 123045027 123052809 123188677 123426167 8081170 106865937 66056167
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