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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102591189   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 sot-r.1   102596443   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 
 sot-r.1   102588665   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 
 sot-r.1   102581082   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 sly-u.5   101246185   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 sly-u.5   101248120   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 sly-u.5   101244207   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 nta-r.1   107794180   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 nta-r.1   107796872   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 nta-r.1   107800511   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like 
 ath-u.5   LSH3   LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 
 ath-u.5   LSH5   LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 
 gma-u.5   100803605   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 gma-u.5   100802937   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 bra-r.6   103858024   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 vvi-u.5   104879291   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 vvi-u.5   100254926   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 vvi-u.5   100244642   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 ppo-u.5   7489106   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 ppo-u.5   7471962   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 
 ppo-u.5   7474992   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 
 mtr-u.5   11410358   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 mtr-u.5   25484251   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 ghi-r.1   107917034   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 ghi-r.1   107923311   protein G1-like3 
 ghi-r.1   107913592   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 
 bna-r.1   125575360   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6-like 
 bna-r.1   106409462   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like 
 bna-r.1   106417463   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 
 cit-r.1   102628291   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 
 cit-r.1   102627798   hypothetical protein 
 cit-r.1   102612277   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like 
 osa-u.5   9266624   protein G1-like5 
 osa-u.5   4330024   protein G1-like3 
 zma-u.5   103651051   protein G1-like7 
 zma-u.5   100274783   putative protein of unknown function (DUF640) domain family protein 
 zma-u.5   100275232   putative protein of unknown function (DUF640) domain family protein 
 tae-r.2   123052627   protein G1-like7 
 tae-r.2   123046119   protein G1-like4 
 hvu-r.1   123427243   protein G1-like4 
 sbi-r.1   8084680   protein G1-like6 
 sbi-r.1   8061327   protein G1-like7 
 bdi-r.1   100821276   protein G1-like4 
 bdi-r.1   100822544   protein G1-like1 

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Top 50 coexpressed genes to 102591189 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102591189 (sot-r.1 coexpression data)

CoexMap"102591189"


sotLOC102591189 | Entrez gene ID : 102591189      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 2 1 3 3 2 3 3 3 2 3 2 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009299 [list] [network] mRNA transcription  (13 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (70 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2556 genes)  IEA  
GO MF
Protein XP_006362411.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for XP_006362411.1)
Subcellular
localization
TargetP
chlo 6,  other 6  (predict for XP_006362411.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102591189
sot-r.1
for
102596443
sot-r.1
for
102588665
sot-r.1
for
102581082
sly-u.5
for
101246185
sly-u.5
for
101248120
sly-u.5
for
101244207
nta-r.1
for
107794180
nta-r.1
for
107796872
nta-r.1
for
107800511
ath-u.5
for
LSH3
ath-u.5
for
LSH5
gma-u.5
for
100803605
gma-u.5
for
100802937
bra-r.6
for
103858024
vvi-u.5
for
104879291
vvi-u.5
for
100254926
vvi-u.5
for
100244642
ppo-u.5
for
7489106
ppo-u.5
for
7471962
ppo-u.5
for
7474992
mtr-u.5
for
11410358
mtr-u.5
for
25484251
ghi-r.1
for
107917034
ghi-r.1
for
107923311
ghi-r.1
for
107913592
bna-r.1
for
125575360
bna-r.1
for
106409462
bna-r.1
for
106417463
cit-r.1
for
102628291
cit-r.1
for
102627798
cit-r.1
for
102612277
osa-u.5
for
9266624
osa-u.5
for
4330024
zma-u.5
for
103651051
zma-u.5
for
100274783
zma-u.5
for
100275232
tae-r.2
for
123052627
tae-r.2
for
123046119
hvu-r.1
for
123427243
sbi-r.1
for
8084680
sbi-r.1
for
8061327
bdi-r.1
for
100821276
bdi-r.1
for
100822544


Ortholog ID: 68
Species sot sot sot sly sly sly nta nta nta ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC102583639 LOC102600485 LOC107058264 LOC101244207 LOC101256738 LOC101261831 LOC107794180 LOC107760918 LOC107766017 LSH3 LSH6 LOC100803605 LOC100778283 LOC102663941 LOC103828755 LOC103865110 LOC103874577 LOC100249172 LOC100260366 LOC100266079 LOC7474992 LOC7467540 LOC7460096 LOC11408401 LOC11407427 LOC107905816 LOC107958534 LOC107936786 LOC106391304 LOC125599502 LOC125602819 LOC102612277 LOC102610331 LOC102606613 LOC4330024 LOC107278610 LOC4336401 LOC100275232 LOC100381724 LOC100304411 LOC123181080 LOC123182342 LOC123427243 LOC123444893 LOC123402509 LOC8054276 LOC8076105 LOC8072493 LOC100821276 LOC100822544 LOC100826147
Function* protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6-like hypothetical protein protein G1-like3 protein G1-like7 protein G1-like4 putative protein of unknown function (DUF640) domain family protein putative protein of unknown function (DUF640) domain family protein putative protein of unknown function (DUF640) domain family protein protein G1-like5 protein G1-like7 protein G1-like4 protein G1-like8 protein G1-like3 protein G1-like4 protein G1-like1 protein G1-like4 protein G1-like4 protein G1-like1 protein G1-like5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00730 Thiamine metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 3
sot00920 Sulfur metabolism 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
ath04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 3
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
vvi00941 Flavonoid biosynthesis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 3
cit01040 Biosynthesis of unsaturated fatty acids 3
cit01212 Fatty acid metabolism 3
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102583639 102600485 107058264 101244207 101256738 101261831 107794180 107760918 107766017 817672 837220 100803605 100778283 102663941 103828755 103865110 103874577 100249172 100260366 100266079 7474992 7467540 7460096 11408401 11407427 107905816 107958534 107936786 106391304 125599502 125602819 102612277 102610331 102606613 4330024 107278610 4336401 100275232 100381724 100304411 123181080 123182342 123427243 123444893 123402509 8054276 8076105 8072493 100821276 100822544 100826147
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