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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102594197  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 sly-u.5  104644825  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 ath-u.5  OTP82  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100812207  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5  100256055  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 mtr-u.5  11444926  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 zma-u.5  103641766  pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

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Top 50 coexpressed genes to 102594197 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102594197 (sot-r.1 coexpression data)

CoexMap"102594197"


sotLOC102594197 | Entrez gene ID : 102594197
Species sot sly ath gma vvi mtr zma sbi nta bra osa cre cit hvu ppo bdi tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006364895.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_006364895.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_006364895.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102594197

.

sly-u.5
for
104644825

.

ath-u.5
for
OTP82

.

gma-u.5
for
100812207

.

vvi-u.5
for
100256055

.

mtr-u.5
for
11444926

.

zma-u.5
for
103641766

.


Ortholog ID: 12481
Species ath gma sly zma bra vvi mtr tae tae ghi ghi bna bna sbi sot cit nta
Symbol OTP82 LOC100812207 LOC104644825 LOC103641766 LOC103871555 LOC100256055 LOC11444926 LOC123189542 LOC123053658 LOC107953712 LOC107939418 LOC106411844 LOC106346362 LOC8058727 LOC102594197 LOC102618797 LOC107825710
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837325 100812207 104644825 103641766 103871555 100256055 11444926 123189542 123053658 107953712 107939418 106411844 106346362 8058727 102594197 102618797 107825710
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