ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102594273	uncharacterized LOC102594273
sly-u.5	101260575	uncharacterized LOC101260575
nta-r.1	107816296	uncharacterized LOC107816296
nta-r.1	107809662	uncharacterized LOC107809662
ath-u.5	AT3G61870	plant/protein
gma-u.5	100798854	uncharacterized LOC100798854
gma-u.5	100788269	uncharacterized LOC100788269
gma-u.5	100780348	uncharacterized LOC100780348
bra-r.6	103842007	uncharacterized LOC103842007
vvi-u.5	100250645	uncharacterized LOC100250645
ppo-u.5	7486793	uncharacterized LOC7486793
mtr-u.5	11423197	uncharacterized LOC11423197
ghi-r.1	107922762	uncharacterized LOC107922762
ghi-r.1	107922861	uncharacterized LOC107922861
bna-r.1	BNAA09G55550D	uncharacterized BNAA09G55550D
bna-r.1	106415459	uncharacterized LOC106415459
cit-r.1	102612533	hypothetical protein
cit-r.1	127901462	uncharacterized LOC127901462
osa-u.5	9271151	uncharacterized LOC9271151
zma-u.5	100275485	uncharacterized LOC100275485
tae-r.2	123130189	uncharacterized LOC123130189
tae-r.2	123135847	uncharacterized LOC123135847
tae-r.2	123143370	uncharacterized LOC123143370
hvu-r.1	123402223	uncharacterized LOC123402223
sbi-r.1	8055043	uncharacterized LOC8055043
bdi-r.1	100821207	uncharacterized LOC100821207
cre-r.1	CHLRE_12g519300v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009534 [list] [network] chloroplast thylakoid

(119 genes)

IEA

GO MF

Protein

XP_006339751.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto_nucl 4, cyto 3, cyto_E.R. 2, nucl 2, mito 1, extr 1

(predict for XP_006339751.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_006339751.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102594273	sly-u.5 for 101260575	nta-r.1 for 107816296	nta-r.1 for 107809662	ath-u.5 for AT3G61870	gma-u.5 for 100798854	gma-u.5 for 100788269	gma-u.5 for 100780348	bra-r.6 for 103842007	vvi-u.5 for 100250645	ppo-u.5 for 7486793	mtr-u.5 for 11423197	ghi-r.1 for 107922762	ghi-r.1 for 107922861	bna-r.1 for BNAA09G55550D	bna-r.1 for 106415459	cit-r.1 for 102612533	cit-r.1 for 127901462	osa-u.5 for 9271151	zma-u.5 for 100275485	tae-r.2 for 123130189	tae-r.2 for 123135847	tae-r.2 for 123143370	hvu-r.1 for 123402223	sbi-r.1 for 8055043	bdi-r.1 for 100821207	cre-r.1 for CHLRE_12g519300v5

Ortholog

Ortholog ID: 8995

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC102594273

uncharacterized LOC101260575

uncharacterized LOC107816296

uncharacterized LOC107809662

plant/protein

uncharacterized LOC100798854

uncharacterized LOC100788269

uncharacterized LOC100780348

uncharacterized LOC103842007

uncharacterized LOC100250645

uncharacterized LOC7486793

uncharacterized LOC11423197

uncharacterized LOC107922762

uncharacterized LOC107922861

uncharacterized BNAA09G55550D

uncharacterized LOC106415459

hypothetical protein

uncharacterized LOC127901462

uncharacterized LOC9271151

uncharacterized LOC100275485

uncharacterized LOC123130189

uncharacterized LOC123135847

uncharacterized LOC123143370

uncharacterized LOC123402223

uncharacterized LOC8055043

uncharacterized LOC100821207

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8
sly00195	Photosynthesis	7
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	3
nta00030	Pentose phosphate pathway	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	3
nta00030	Pentose phosphate pathway	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	6
ath01200	Carbon metabolism	2
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	5
gma00710	Carbon fixation by Calvin cycle	3
gma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00710	Carbon fixation by Calvin cycle	9
gma01200	Carbon metabolism	9
gma00195	Photosynthesis	5
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	8
gma00195	Photosynthesis	7
gma00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00710	Carbon fixation by Calvin cycle	5
bra01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	7
vvi00196	Photosynthesis - antenna proteins	2
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	5
mtr00710	Carbon fixation by Calvin cycle	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	3
ghi00190	Oxidative phosphorylation	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00566	Sulfoquinovose metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	4
ghi00190	Oxidative phosphorylation	2
ghi00906	Carotenoid biosynthesis	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	10
bna00190	Oxidative phosphorylation	4
bna00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	10
bna00190	Oxidative phosphorylation	4
bna00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae00195	Photosynthesis	4
tae00561	Glycerolipid metabolism	2
tae00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

102594273

101260575

107816296

107809662

825360

100798854

100788269

100780348

103842007

100250645

7486793

11423197

107922762

107922861

106368490

106415459

102612533

127901462

9271151

100275485

123130189

123135847

123143370

123402223

8055043

100821207

5722613

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102594273 (sot-r.1 coexpression data)

Top 50 enrichment test to 102594273 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	2	1	3	1	1	1	1	2	2	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102594273 (sot-r.1 coexpression data)

Top 50 enrichment test to 102594273 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**