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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596547   ATP synthase gamma chain, chloroplastic 
 sly-u.5   101257833   ATP synthase gamma chain, chloroplastic-like 
 sly-u.5   101253342   ATP synthase gamma chain, chloroplastic 
 ath-u.5   ATPC1   ATPase, F1 complex, gamma subunit protein 
 gma-u.5   100797290   ATP synthase gamma chain, chloroplastic 
 gma-u.5   ATPC   ATP synthase gamma chain, chloroplastic 
 vvi-u.5   100264091   ATP synthase gamma chain, chloroplastic 
 vvi-u.5   100258958   ATP synthase gamma chain 1, chloroplastic 
 ppo-u.5   7485426   ATP synthase gamma chain, chloroplastic 
 ppo-u.5   112325759   ATP synthase gamma chain, chloroplastic 
 mtr-u.5   25481739   ATP synthase gamma chain, chloroplastic 
 mtr-u.5   11428261   ATP synthase gamma chain 2, chloroplastic 
 osa-u.5   4343366   ATP synthase subunit gamma, chloroplastic 
 zma-u.5   100284505   ATP synthase chloroplast subunit2 

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Top 50 coexpressed genes to 102596547 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596547 (sot-r.1 coexpression data)

CoexMap"102596547"


sotLOC102596547 | Entrez gene ID : 102596547      
Species sot sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi bra sbi tae nta bna
Paralog 1 2 1 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00190 [list] [network] Oxidative phosphorylation (149 genes)
sot00195 [list] [network] Photosynthesis (86 genes)
GO BP
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (23 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (97 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (15 genes)  IEA  
Protein XP_006348117.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006348117.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006348117.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596547

.
sly-u.5
for
101257833

.
sly-u.5
for
101253342

.
ath-u.5
for
ATPC1

.
gma-u.5
for
100797290

.
gma-u.5
for
ATPC

.
vvi-u.5
for
100264091

.
vvi-u.5
for
100258958

.
ppo-u.5
for
7485426

.
ppo-u.5
for
112325759

.
mtr-u.5
for
25481739

.
mtr-u.5
for
11428261

.
osa-u.5
for
4343366

.
zma-u.5
for
100284505

.


Ortholog ID: 4259
Species ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol ATPC1 ATPC LOC100797290 LOC101257833 LOC101253342 LOC4343366 LOC100284505 LOC103868164 LOC103839821 LOC100258958 LOC100264091 LOC112325759 LOC7485426 LOC25481739 LOC11428261 LOC123052557 LOC123044694 LOC123425909 LOC107901956 LOC107917896 LOC106403328 LOC106446624 CHLRE_06g259900v5 LOC110432281 LOC102603946 LOC102596547 LOC102628129 LOC102629991 LOC100824663 LOC107792409 LOC107818045
Function* ATPase, F1 complex, gamma subunit protein ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase chloroplast subunit2 ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 2, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 2, chloroplastic-like ATP synthase gamma chain 1, chloroplastic uncharacterized protein ATP synthase subunit gamma, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath01200 Carbon metabolism 3
ath00190 Oxidative phosphorylation 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma00030 Pentose phosphate pathway 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 12
sly00710 Carbon fixation by Calvin cycle 10
sly00030 Pentose phosphate pathway 4
sly01230 Biosynthesis of amino acids 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 11
osa00190 Oxidative phosphorylation 3
osa00710 Carbon fixation by Calvin cycle 3
osa01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 13
bra00190 Oxidative phosphorylation 3
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00195 Photosynthesis 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00195 Photosynthesis 6
ppo00710 Carbon fixation by Calvin cycle 5
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00300 Lysine biosynthesis 2
ppo00470 D-Amino acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
tae00190 Oxidative phosphorylation 9
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 15
tae00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00710 Carbon fixation by Calvin cycle 5
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00260 Glycine, serine and threonine metabolism 3
hvu00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00195 Photosynthesis 5
cre00630 Glyoxylate and dicarboxylate metabolism 4
cre00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi01240 Biosynthesis of cofactors 3
sbi00190 Oxidative phosphorylation 2
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit00196 Photosynthesis - antenna proteins 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi00195 Photosynthesis 3
bdi00190 Oxidative phosphorylation 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 10
nta01200 Carbon metabolism 10
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825797 100037480 100797290 101257833 101253342 4343366 100284505 103868164 103839821 100258958 100264091 112325759 7485426 25481739 11428261 123052557 123044694 123425909 107901956 107917896 106403328 106446624 5722055 110432281 102603946 102596547 102628129 102629991 100824663 107792409 107818045
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