ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102596782	uncharacterized LOC102596782
sly-u.5	101250822	uncharacterized LOC101250822
ath-u.5	AT1G12800	Nucleic acid-binding, OB-fold-like protein
gma-u.5	100809060	uncharacterized LOC100809060
vvi-u.5	100265091	uncharacterized LOC100265091
ppo-u.5	7458159	uncharacterized LOC7458159
mtr-u.5	25502035	uncharacterized LOC25502035
osa-u.5	4328072	uncharacterized LOC4328072
zma-u.5	103626522	Nucleic acid-binding OB-fold-like protein

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003676 [list] [network] nucleic acid binding

(3830 genes)

IEA

Protein

XP_006352282.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, plas 1, nucl 1, vacu 1, E.R. 1, golg 1, E.R._vacu 1, cysk_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_006352282.1)

Subcellular
localization
TargetP

chlo 4, mito 3

(predict for XP_006352282.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102596782	sly-u.5 for 101250822	ath-u.5 for AT1G12800	gma-u.5 for 100809060	vvi-u.5 for 100265091	ppo-u.5 for 7458159	mtr-u.5 for 25502035	osa-u.5 for 4328072	zma-u.5 for 103626522

Ortholog ID: 11044

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102596782

uncharacterized LOC101250822

uncharacterized LOC107806133

uncharacterized LOC107823804

Nucleic acid-binding, OB-fold-like protein

uncharacterized LOC100809060

uncharacterized LOC103871978

uncharacterized LOC100265091

uncharacterized LOC7458159

uncharacterized LOC25502035

uncharacterized LOC107947010

uncharacterized LOC107936424

uncharacterized LOC106433592

uncharacterized LOC125610191

uncharacterized LOC102625164

uncharacterized LOC4328072

Nucleic acid-binding OB-fold-like protein

uncharacterized LOC123143182

uncharacterized LOC123135608

uncharacterized LOC123401374

uncharacterized LOC8068220

uncharacterized LOC100843989

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2
mtr00860	Porphyrin metabolism	2
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	4
bna00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna00500	Starch and sucrose metabolism	4
bna00860	Porphyrin metabolism	4
bna00906	Carotenoid biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	2
cit00030	Pentose phosphate pathway	2
cit00230	Purine metabolism	2
cit00500	Starch and sucrose metabolism	2
cit00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	2
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00860	Porphyrin metabolism	2
hvu01240	Biosynthesis of cofactors	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	3
bdi00970	Aminoacyl-tRNA biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

102596782

101250822

107806133

107823804

837836

100809060

103871978

100265091

7458159

25502035

107947010

107936424

106433592

125610191

102625164

4328072

103626522

123143182

123135608

123401374

8068220

100843989

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102596782 (sot-r.1 coexpression data)

Top 50 enrichment test to 102596782 (sot-r.1 coexpression data)


Species	sot	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	nta	cre	tae
Paralog	1	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102596782 (sot-r.1 coexpression data)

Top 50 enrichment test to 102596782 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**