Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596989   F-box protein CPR30-like 
 sly-u.5   101260412   F-box/kelch-repeat protein At3g06240 
 ath-u.5   AT3G06240   F-box family protein 
 ath-u.5   AT3G07870   F-box and associated interaction domains-containing protein 
 ath-u.5   AT3G23880   F-box and associated interaction domains-containing protein 
 gma-u.5   102666785   F-box/kelch-repeat protein At3g17530 
 ppo-u.5   7455978   F-box protein At3g07870 
 ppo-u.5   7455824   F-box protein CPR1 
 mtr-u.5   120580159   F-box/kelch-repeat protein At3g06240 
 mtr-u.5   120580220   F-box/kelch-repeat protein At3g06240 

close


Top 50 coexpressed genes to 102596989 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102596989 (sot-r.1 coexpression data)

CoexMap"102596989"


sotLOC102596989 | Entrez gene ID : 102596989      
Species sot sly ath gma ppo mtr bdi hvu bra vvi cit bna sbi ghi osa nta cre tae zma
Paralog 1 1 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006348858.1 [sequence] [blastp]
XP_015164861.1 [sequence] [blastp]
XP_015164862.1 [sequence] [blastp]
XP_015164863.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cyto_mito 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_006348858.1)
cyto 6,  mito 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cyto_mito 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_015164861.1)
cyto 6,  nucl 1,  mito 1,  E.R. 1  (predict for XP_015164862.1)
cyto 4,  nucl 2,  cyto_E.R. 2,  chlo 1,  nucl_plas 1  (predict for XP_015164863.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for XP_006348858.1)
scret 7,  other 3  (predict for XP_015164861.1)
scret 8,  other 7  (predict for XP_015164862.1)
scret 8,  other 5  (predict for XP_015164863.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596989
sly-u.5
for
101260412
ath-u.5
for
AT3G06240
ath-u.5
for
AT3G07870
ath-u.5
for
AT3G23880
gma-u.5
for
102666785
ppo-u.5
for
7455978
ppo-u.5
for
7455824
mtr-u.5
for
120580159
mtr-u.5
for
120580220


Ortholog ID: 25
Species sot sly nta nta ath ath gma gma mtr ghi bna bdi
Symbol LOC107062273 LOC101244418 LOC107824897 LOC107792385 AT3G07870 AT3G06240 LOC100789250 LOC100789763 LOC25483269 LOC107888906 LOC106388992 LOC100823474
Function* F-box/kelch-repeat protein At3g06240-like F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box and associated interaction domains-containing protein F-box family protein putative F-box protein F-box protein CPR1 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g06240 F-box protein At3g07870-like F-box/LRR-repeat protein At2g43260
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna00480 Glutathione metabolism 2
bna00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107062273 101244418 107824897 107792385 819978 819798 100789250 100789763 25483269 107888906 106388992 100823474
The preparation time of this page was 0.1 [sec].