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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102597654   putative pentatricopeptide repeat-containing protein At1g10330 
 sot-r.1   107060835   putative pentatricopeptide repeat-containing protein At1g10330 
 sly-u.5   101258584   putative pentatricopeptide repeat-containing protein At1g10330 
 nta-r.1   107805665   putative pentatricopeptide repeat-containing protein At1g10330 
 nta-r.1   142172939   putative pentatricopeptide repeat-containing protein At1g10330 
 ath-u.5   AT1G10330   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100798543   putative pentatricopeptide repeat-containing protein At1g10330 
 bra-r.6   103871805   putative pentatricopeptide repeat-containing protein At1g10330 
 vvi-u.5   100260189   putative pentatricopeptide repeat-containing protein At1g10330 
 ghi-r.1   107961972   putative pentatricopeptide repeat-containing protein At1g10330 
 ghi-r.1   107962057   putative pentatricopeptide repeat-containing protein At1g10330 
 bna-r.1   125610168   putative pentatricopeptide repeat-containing protein At1g10330 
 bna-r.1   106350490   putative pentatricopeptide repeat-containing protein At1g10330 
 bna-r.1   106346206   putative pentatricopeptide repeat-containing protein At1g10330 
 cit-r.1   102626952   putative pentatricopeptide repeat-containing protein At1g10330 
 osa-u.5   4338264   putative pentatricopeptide repeat-containing protein At1g10330 
 zma-u.5   103650264   putative pentatricopeptide repeat-containing protein At1g10330 
 tae-r.2   123086633   putative pentatricopeptide repeat-containing protein At1g10330 
 bdi-r.1   100826266   putative pentatricopeptide repeat-containing protein At1g10330 

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Top 50 coexpressed genes to 102597654 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102597654 (sot-r.1 coexpression data)

CoexMap"102597654"


sotLOC102597654 | Entrez gene ID : 102597654    
Species sot sly nta ath gma bra vvi ghi bna cit osa zma tae bdi cre ppo sbi mtr hvu
Paralog 2 1 2 1 1 1 1 2 3 1 1 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006354137.1 [sequence] [blastp]
XP_006354138.1 [sequence] [blastp]
XP_015167147.1 [sequence] [blastp]
XP_015167148.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_006354137.1)
chlo 8,  mito 1  (predict for XP_006354138.1)
chlo 8,  mito 1  (predict for XP_015167147.1)
chlo 8,  mito 1  (predict for XP_015167148.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_006354137.1)
other 7,  mito 3  (predict for XP_006354138.1)
other 7,  mito 3  (predict for XP_015167147.1)
other 7,  mito 3  (predict for XP_015167148.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102597654
sot-r.1
for
107060835
sly-u.5
for
101258584
nta-r.1
for
107805665
nta-r.1
for
142172939
ath-u.5
for
AT1G10330
gma-u.5
for
100798543
bra-r.6
for
103871805
vvi-u.5
for
100260189
ghi-r.1
for
107961972
ghi-r.1
for
107962057
bna-r.1
for
125610168
bna-r.1
for
106350490
bna-r.1
for
106346206
cit-r.1
for
102626952
osa-u.5
for
4338264
zma-u.5
for
103650264
tae-r.2
for
123086633
bdi-r.1
for
100826266


Ortholog ID: 7787
Species sot sot sly nta nta ath gma bra vvi ghi ghi bna bna bna cit osa zma tae bdi
Symbol LOC102597654 LOC107060835 LOC101258584 LOC107805665 LOC142172939 AT1G10330 LOC100798543 LOC103871805 LOC100260189 LOC107961972 LOC107962057 LOC125610168 LOC106350490 LOC106346206 LOC102626952 LOC4338264 LOC103650264 LOC123086633 LOC100826266
Function* putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330 putative pentatricopeptide repeat-containing protein At1g10330
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04016 MAPK signaling pathway - plant 3
bdi04142 Lysosome 2
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102597654 107060835 101258584 107805665 142172939 837572 100798543 103871805 100260189 107961972 107962057 125610168 106350490 106346206 102626952 4338264 103650264 123086633 100826266
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