Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599064   glycine-rich RNA-binding protein 4, mitochondrial 
 sly-u.5   101263896   glycine-rich RNA-binding protein 4, mitochondrial 
 nta-r.1   107811974   glycine-rich RNA-binding protein 4, mitochondrial 
 nta-r.1   107796876   glycine-rich RNA-binding protein 4, mitochondrial 
 nta-r.1   107783971   glycine-rich RNA-binding protein 4, mitochondrial-like 
 gma-u.5   100306540   uncharacterized LOC100306540 
 gma-u.5   100802141   small RNA-binding protein 11, chloroplastic 
 vvi-u.5   100855070   glycine-rich RNA-binding protein 4, mitochondrial 
 mtr-u.5   11437600   glycine-rich RNA-binding protein 2, mitochondrial 
 ghi-r.1   107916969   glycine-rich RNA-binding protein 4, mitochondrial 
 ghi-r.1   107921296   glycine-rich RNA-binding protein 4, mitochondrial 
 osa-u.5   4324297   glycine-rich RNA-binding protein 2, mitochondrial 
 tae-r.2   123063727   glycine-rich RNA-binding protein 2, mitochondrial 
 sbi-r.1   8074141   glycine-rich RNA-binding protein 4, mitochondrial 

close


Top 50 coexpressed genes to 102599064 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102599064 (sot-r.1 coexpression data)

CoexMap"102599064"


sotLOC102599064 | Entrez gene ID : 102599064    
Species sot sly nta gma vvi mtr ghi osa tae sbi hvu bdi bna ppo zma cre ath bra cit
Paralog 1 1 3 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006350171.1 [sequence] [blastp]
XP_006350172.1 [sequence] [blastp]
XP_006350173.1 [sequence] [blastp]
XP_015165403.1 [sequence] [blastp]
XP_015165404.1 [sequence] [blastp]
XP_015165405.1 [sequence] [blastp]
XP_015165406.1 [sequence] [blastp]
XP_015165407.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_006350171.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_006350172.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_006350173.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_015165403.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_015165404.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_015165405.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_015165406.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for XP_015165407.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006350171.1)
mito 7  (predict for XP_006350172.1)
mito 7  (predict for XP_006350173.1)
mito 8  (predict for XP_015165403.1)
mito 8  (predict for XP_015165404.1)
mito 8  (predict for XP_015165405.1)
mito 8  (predict for XP_015165406.1)
mito 7  (predict for XP_015165407.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599064
sly-u.5
for
101263896
nta-r.1
for
107811974
nta-r.1
for
107796876
nta-r.1
for
107783971
gma-u.5
for
100306540
gma-u.5
for
100802141
vvi-u.5
for
100855070
mtr-u.5
for
11437600
ghi-r.1
for
107916969
ghi-r.1
for
107921296
osa-u.5
for
4324297
tae-r.2
for
123063727
sbi-r.1
for
8074141


Ortholog ID: 9318
Species sot sly nta nta nta gma gma vvi mtr ghi ghi osa sbi
Symbol LOC102599064 LOC101263896 LOC107811974 LOC107796876 LOC107783971 LOC100306540 LOC100802141 LOC100855070 LOC11437600 LOC107916969 LOC107921296 LOC4324297 LOC8074141
Function* glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial-like uncharacterized LOC100306540 small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta00480 Glutathione metabolism 3
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi00260 Glycine, serine and threonine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi03410 Base excision repair 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00470 D-Amino acid metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102599064 101263896 107811974 107796876 107783971 100306540 100802141 100855070 11437600 107916969 107921296 4324297 8074141
The preparation time of this page was 0.1 [sec].