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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599435   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 nta-r.1   107801335   protein WHAT'S THIS FACTOR 9, mitochondrial 
 nta-r.1   107814575   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ath-u.5   AT5G48040   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100794689   protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5   100776008   protein WHAT'S THIS FACTOR 9, mitochondrial 
 bra-r.6   103874925   protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5   100263505   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5   7489912   protein WHAT'S THIS FACTOR 9, mitochondrial 
 mtr-u.5   11442341   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1   107887272   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1   121203081   protein WHAT'S THIS FACTOR 9, mitochondrial 
 bna-r.1   106348965   protein WHAT'S THIS FACTOR 9, mitochondrial 
 cit-r.1   102623447   protein WHAT'S THIS FACTOR 9, mitochondrial 
 osa-u.5   107280065   protein WHAT'S THIS FACTOR 9, mitochondrial 
 zma-u.5   100276565   uncharacterized LOC100276565 
 bdi-r.1   100837700   protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to 102599435 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102599435 (sot-r.1 coexpression data)

CoexMap"102599435"


sotLOC102599435 | Entrez gene ID : 102599435      
Species sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma bdi sly tae sbi cre hvu
Paralog 1 2 1 2 1 1 1 1 2 1 1 1 1 1 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006361373.1 [sequence] [blastp]
XP_006361374.1 [sequence] [blastp]
XP_015170743.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 3  (predict for XP_006361373.1)
mito 6,  cyto_mito 4,  chlo 3  (predict for XP_006361374.1)
mito 6,  cyto_mito 4,  chlo 3  (predict for XP_015170743.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for XP_006361373.1)
mito 7,  other 5  (predict for XP_006361374.1)
mito 7,  other 5  (predict for XP_015170743.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599435
nta-r.1
for
107801335
nta-r.1
for
107814575
ath-u.5
for
AT5G48040
gma-u.5
for
100794689
gma-u.5
for
100776008
bra-r.6
for
103874925
vvi-u.5
for
100263505
ppo-u.5
for
7489912
mtr-u.5
for
11442341
ghi-r.1
for
107887272
ghi-r.1
for
121203081
bna-r.1
for
106348965
cit-r.1
for
102623447
osa-u.5
for
107280065
zma-u.5
for
100276565
bdi-r.1
for
100837700


Ortholog ID: 10984
Species sot nta nta ath gma gma bra vvi ppo mtr ghi ghi bna cit osa zma bdi
Symbol LOC102599435 LOC107801335 LOC107814575 AT5G48040 LOC100794689 LOC100776008 LOC103874925 LOC100263505 LOC7489912 LOC11442341 LOC107887272 LOC121203081 LOC106348965 LOC102623447 LOC107280065 LOC100276565 LOC100837700
Function* protein ROOT PRIMORDIUM DEFECTIVE 1-like protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial uncharacterized LOC100276565 protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 5
bna03030 DNA replication 3
bna03420 Nucleotide excision repair 3
bna03430 Mismatch repair 3
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102599435 107801335 107814575 834855 100794689 100776008 103874925 100263505 7489912 11442341 107887272 121203081 106348965 102623447 107280065 100276565 100837700
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