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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102599757   vacuolar protein sorting-associated protein 35A-like 
 sly-u.5   101265987   vacuolar protein sorting-associated protein 35A 
 sly-u.5   101249253   vacuolar protein sorting-associated protein 35B 
 sly-u.5   101243768   vacuolar protein sorting-associated protein 35A-like 
 ath-u.5   VPS35A   vacuolar protein sorting-associated 35A-like protein 
 ath-u.5   VPS35C   VPS35 homolog C 
 ath-u.5   VPS35B   VPS35 homolog B 
 gma-u.5   100778365   vacuolar protein sorting-associated protein 35B 
 gma-u.5   100775573   vacuolar protein sorting-associated protein 35B 
 gma-u.5   100811902   vacuolar protein sorting-associated protein 35A 
 vvi-u.5   100248964   vacuolar protein sorting-associated protein 35A 
 vvi-u.5   100243826   vacuolar protein sorting-associated protein 35B 
 ppo-u.5   7496914   vacuolar protein sorting-associated protein 35B 
 ppo-u.5   7485605   vacuolar protein sorting-associated protein 35B 
 ppo-u.5   18099161   vacuolar protein sorting-associated protein 35A 
 mtr-u.5   11413082   vacuolar protein sorting-associated protein 35B 
 mtr-u.5   11423814   vacuolar protein sorting-associated protein 35A 
 osa-u.5   4334459   vacuolar protein sorting-associated protein 35B 
 zma-u.5   100285267   vacuolar protein sorting 35 
 zma-u.5   100279276   uncharacterized LOC100279276 

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Top 50 coexpressed genes to 102599757 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102599757 (sot-r.1 coexpression data)

CoexMap"102599757"


sotLOC102599757 | Entrez gene ID : 102599757    
Species sot sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi nta cre tae
Paralog 1 3 3 3 2 3 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot04144 [list] [network] Endocytosis (179 genes)
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (17 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (245 genes)  IEA  
GO CC
GO:0030906 [list] [network] retromer, cargo-selective complex  (3 genes)  IEA  
GO:0030904 [list] [network] retromer complex  (4 genes)  IEA  
GO:0005770 [list] [network] late endosome  (30 genes)  IEA  
GO MF
Protein XP_006340766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  vacu 1  (predict for XP_006340766.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006340766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102599757
sly-u.5
for
101265987
sly-u.5
for
101249253
sly-u.5
for
101243768
ath-u.5
for
VPS35A
ath-u.5
for
VPS35C
ath-u.5
for
VPS35B
gma-u.5
for
100778365
gma-u.5
for
100775573
gma-u.5
for
100811902
vvi-u.5
for
100248964
vvi-u.5
for
100243826
ppo-u.5
for
7496914
ppo-u.5
for
7485605
ppo-u.5
for
18099161
mtr-u.5
for
11413082
mtr-u.5
for
11423814
osa-u.5
for
4334459
zma-u.5
for
100285267
zma-u.5
for
100279276


Ortholog ID: 2787
Species sot sot sly sly nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa zma zma tae tae hvu sbi bdi cre
Symbol LOC102587668 LOC102583363 LOC101265987 LOC101243768 LOC107768374 LOC107816643 VPS35B VPS35A LOC100809289 LOC100778365 LOC103841052 LOC103845916 LOC100243826 LOC100248964 LOC7485605 LOC7496914 LOC11423814 LOC11413082 LOC107920975 LOC107912021 LOC111206401 LOC106453782 LOC102607490 LOC102612955 LOC4334459 LOC100285267 LOC100279276 LOC123123265 LOC123105482 LOC123452787 LOC8061151 LOC100829040 CHLRE_01g029650v5
Function* vacuolar protein sorting-associated protein 35B-like vacuolar protein sorting-associated protein 35A-like vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35A-like vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B VPS35 homolog B vacuolar protein sorting-associated 35A-like protein vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35C vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B-like vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35A vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B vacuolar protein sorting 35 uncharacterized LOC100279276 vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B-like vacuolar protein sorting-associated protein 35B vacuolar protein sorting-associated protein 35B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 6
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr00620 Pyruvate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 3
zma04120 Ubiquitin mediated proteolysis 2
zma03083 Polycomb repressive complex 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04142 Lysosome 3
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
cre04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102587668 102583363 101265987 101243768 107768374 107816643 843918 816289 100809289 100778365 103841052 103845916 100243826 100248964 7485605 7496914 11423814 11413082 107920975 107912021 111206401 106453782 102607490 102612955 4334459 100285267 100279276 123123265 123105482 123452787 8061151 100829040 5715351
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