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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102601327   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 sly-u.5   101256723   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 nta-r.1   107764259   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 nta-r.1   107820852   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 ath-u.5   PnsL1   PsbP-like protein 2 
 gma-u.5   100798877   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 gma-u.5   100813624   PsbP-like protein 
 gma-u.5   100818731   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 bra-r.6   103867036   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 vvi-u.5   100242691   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 ppo-u.5   7458602   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 mtr-u.5   25485716   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 ghi-r.1   107926059   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 ghi-r.1   107959886   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 bna-r.1   106395927   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 bna-r.1   106451001   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 cit-r.1   102629493   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 osa-u.5   9267250   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 zma-u.5   103634474   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 tae-r.2   123085487   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 tae-r.2   123092559   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 tae-r.2   123097864   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 hvu-r.1   123448985   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 sbi-r.1   110431204   photosynthetic NDH subunit of lumenal location 1, chloroplastic 
 bdi-r.1   100821961   photosynthetic NDH subunit of lumenal location 1, chloroplastic 

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Top 50 coexpressed genes to 102601327 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102601327 (sot-r.1 coexpression data)

CoexMap"102601327"


sotLOC102601327 | Entrez gene ID : 102601327      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 3 1 1 1 1 2 2 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (24 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (31 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (256 genes)  IEA  
Protein XP_006360615.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006360615.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006360615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102601327
sly-u.5
for
101256723
nta-r.1
for
107764259
nta-r.1
for
107820852
ath-u.5
for
PnsL1
gma-u.5
for
100798877
gma-u.5
for
100813624
gma-u.5
for
100818731
bra-r.6
for
103867036
vvi-u.5
for
100242691
ppo-u.5
for
7458602
mtr-u.5
for
25485716
ghi-r.1
for
107926059
ghi-r.1
for
107959886
bna-r.1
for
106395927
bna-r.1
for
106451001
cit-r.1
for
102629493
osa-u.5
for
9267250
zma-u.5
for
103634474
tae-r.2
for
123085487
tae-r.2
for
123092559
tae-r.2
for
123097864
hvu-r.1
for
123448985
sbi-r.1
for
110431204
bdi-r.1
for
100821961


Ortholog ID: 10032
Species sot sly nta nta ath gma gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC102601327 LOC101256723 LOC107764259 LOC107820852 PnsL1 LOC100798877 LOC100813624 LOC100818731 LOC103867036 LOC100242691 LOC7458602 LOC25485716 LOC107926059 LOC107959886 LOC106395927 LOC106451001 LOC102629493 LOC9267250 LOC103634474 LOC123085487 LOC123092559 LOC123097864 LOC123448985 LOC110431204 LOC100821961
Function* photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic PsbP-like protein 2 photosynthetic NDH subunit of lumenal location 1, chloroplastic PsbP-like protein photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic photosynthetic NDH subunit of lumenal location 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
ath00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 3
bra00195 Photosynthesis 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi01200 Carbon metabolism 3
vvi00190 Oxidative phosphorylation 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 3
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 11
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 4
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 11
tae00710 Carbon fixation by Calvin cycle 11
tae01200 Carbon metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 14
tae00710 Carbon fixation by Calvin cycle 14
tae01200 Carbon metabolism 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 9
tae01200 Carbon metabolism 9
tae00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00630 Glyoxylate and dicarboxylate metabolism 6
hvu00710 Carbon fixation by Calvin cycle 5
hvu00196 Photosynthesis - antenna proteins 2
hvu00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102601327 101256723 107764259 107820852 818532 100798877 100813624 100818731 103867036 100242691 7458602 25485716 107926059 107959886 106395927 106451001 102629493 9267250 103634474 123085487 123092559 123097864 123448985 110431204 100821961
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