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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602058   metal transporter Nramp2-like 
 sly-u.5   Nramp2   metal transporter Nramp2 
 sly-u.5   NRAMP3   metal transporter 
 ath-u.5   NRAMP3   natural resistance-associated macrophage protein 3 
 ath-u.5   NRAMP4   natural resistance associated macrophage protein 4 
 ath-u.5   NRAMP2   NRAMP metal ion transporter 2 
 gma-u.5   NRAMP3B   metal transporter Nramp3b 
 gma-u.5   NRAMP2A   metal transporter Nramp2a 
 gma-u.5   NRAMP1A   divalent metal ion transporter NRAMP1a 
 vvi-u.5   100262579   metal transporter Nramp2 
 vvi-u.5   100268041   metal transporter Nramp3.2 
 ppo-u.5   7472676   metal transporter Nramp2 
 ppo-u.5   18101156   metal transporter Nramp3 
 ppo-u.5   18101157   metal transporter Nramp3 
 mtr-u.5   11407831   metal transporter Nramp3 
 mtr-u.5   25489927   metal transporter Nramp2 
 osa-u.5   4333420   metal transporter Nramp6-like 
 osa-u.5   4332012   metal transporter Nramp2-like 
 osa-u.5   4352640   metal transporter Nramp6-like 
 zma-u.5   100383075   uncharacterized LOC100383075 
 zma-u.5   100283910   uncharacterized LOC100283910 

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Top 50 coexpressed genes to 102602058 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602058 (sot-r.1 coexpression data)

CoexMap"102602058"


sotLOC102602058 | Entrez gene ID : 102602058      
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 2 3 3 2 3 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot04142 [list] [network] Lysosome (87 genes)
GO BP
GO:0034755 [list] [network] iron ion transmembrane transport  (9 genes)  IEA  
GO:0006828 [list] [network] manganese ion transport  (10 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (72 genes)  IEA  
GO:0016020 [list] [network] membrane  (3081 genes)  IEA  
GO MF
GO:0015086 [list] [network] cadmium ion transmembrane transporter activity  (6 genes)  IEA  
GO:0005384 [list] [network] manganese ion transmembrane transporter activity  (25 genes)  IEA  
Protein XP_006368038.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9  (predict for XP_006368038.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006368038.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602058
sly-u.5
for
Nramp2
sly-u.5
for
NRAMP3
ath-u.5
for
NRAMP3
ath-u.5
for
NRAMP4
ath-u.5
for
NRAMP2
gma-u.5
for
NRAMP3B
gma-u.5
for
NRAMP2A
gma-u.5
for
NRAMP1A
vvi-u.5
for
100262579
vvi-u.5
for
100268041
ppo-u.5
for
7472676
ppo-u.5
for
18101156
ppo-u.5
for
18101157
mtr-u.5
for
11407831
mtr-u.5
for
25489927
osa-u.5
for
4333420
osa-u.5
for
4332012
osa-u.5
for
4352640
zma-u.5
for
100383075
zma-u.5
for
100283910


Ortholog ID: 1485
Species sot sot sly sly nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae hvu sbi bdi bdi cre
Symbol LOC102602058 LOC102578842 NRAMP3 Nramp2 LOC107798557 LOC107798562 NRAMP4 NRAMP2 NRAMP3A NRAMP2A LOC103829512 LOC103849582 LOC100268041 LOC100262579 LOC7472676 LOC18101156 LOC25489927 LOC25493521 LOC107931677 LOC107905619 LOC125584396 LOC106371864 LOC102621721 LOC102613637 LOC4333420 LOC4352640 LOC100283910 LOC100383075 LOC123119624 LOC123449372 LOC8069691 LOC100845842 LOC100828548 CHLRE_05g248300v5
Function* metal transporter Nramp2-like metal transporter Nramp2-like metal transporter metal transporter Nramp2 metal transporter Nramp2-like metal transporter Nramp3.2 natural resistance associated macrophage protein 4 NRAMP metal ion transporter 2 metal transporter Nramp3a metal transporter Nramp2a metal transporter Nramp4 metal transporter Nramp2 metal transporter Nramp3.2 metal transporter Nramp2 metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp3 metal transporter Nramp2 metal transporter Nramp3-like metal transporter Nramp2 metal transporter Nramp3 metal transporter Nramp2-like metal transporter Nramp6-like metal transporter Nramp6-like uncharacterized LOC100283910 uncharacterized LOC100383075 metal transporter Nramp6 metal transporter Nramp2 metal transporter Nramp6 metal transporter Nramp2 metal transporter Nramp6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 4
ath04142 Lysosome 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi00730 Thiamine metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 3
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00513 Various types of N-glycan biosynthesis 3
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04144 Endocytosis 3
ppo04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 4
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04142 Lysosome 2
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04081 Hormone signaling 2
cre00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602058 102578842 544257 543927 107798557 107798562 836868 841127 100791117 100812381 103829512 103849582 100268041 100262579 7472676 18101156 25489927 25493521 107931677 107905619 125584396 106371864 102621721 102613637 4333420 4352640 100283910 100383075 123119624 123449372 8069691 100845842 100828548 66053512
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