ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102602559	uncharacterized LOC102602559
sot-r.1	102595108	uncharacterized LOC102595108
sot-r.1	102596878	uncharacterized LOC102596878
sly-u.5	101251365	vacuolar protein sorting-associated protein IST1
sly-u.5	101256602	uncharacterized LOC101256602
nta-r.1	107769833	uncharacterized LOC107769833
nta-r.1	107818491	uncharacterized LOC107818491
ath-u.5	AT1G79910	Regulator of Vps4 activity in the MVB pathway protein
ath-u.5	AT1G52315	Regulator of Vps4 activity in the MVB pathway protein
gma-u.5	100820462	uncharacterized LOC100820462
gma-u.5	100812444	uncharacterized LOC100812444
vvi-u.5	104880647	uncharacterized LOC104880647
vvi-u.5	100251435	uncharacterized LOC100251435
ppo-u.5	18107618	uncharacterized LOC18107618
ppo-u.5	7473036	uncharacterized LOC7473036
mtr-u.5	11409191	IST1-like protein
mtr-u.5	11432045	uncharacterized LOC11432045
mtr-u.5	25496909	uncharacterized LOC25496909
ghi-r.1	107949590	uncharacterized LOC107949590
ghi-r.1	107933008	polycomb group protein FERTILIZATION-INDEPENDENT SEED 2
ghi-r.1	107930858	uncharacterized LOC107930858
cit-r.1	102616577	uncharacterized LOC102616577
osa-u.5	9271691	uncharacterized LOC9271691
osa-u.5	4328370	uncharacterized LOC4328370
zma-u.5	103628194	uncharacterized LOC103628194
zma-u.5	100383750	uncharacterized LOC100383750
tae-r.2	123136410	uncharacterized LOC123136410
hvu-r.1	123401050	uncharacterized LOC123401050
sbi-r.1	8074661	uncharacterized LOC8074661
bdi-r.1	100836034	uncharacterized LOC100836034
bdi-r.1	100832711	uncharacterized LOC100832711

Annotation

functional annotation

KEGG

GO BP

GO:0015031 [list] [network] protein transport

(329 genes)

IEA

GO CC

GO MF

Protein

XP_006341716.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 4, mito 1, plas 1, mito_plas 1

(predict for XP_006341716.1)

Subcellular
localization
TargetP

other 8

(predict for XP_006341716.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102602559	sot-r.1 for 102595108	sot-r.1 for 102596878	sly-u.5 for 101251365	sly-u.5 for 101256602	nta-r.1 for 107769833	nta-r.1 for 107818491	ath-u.5 for AT1G79910	ath-u.5 for AT1G52315	gma-u.5 for 100820462	gma-u.5 for 100812444	vvi-u.5 for 104880647	vvi-u.5 for 100251435	ppo-u.5 for 18107618	ppo-u.5 for 7473036	mtr-u.5 for 11409191	mtr-u.5 for 11432045	mtr-u.5 for 25496909	ghi-r.1 for 107949590	ghi-r.1 for 107933008	ghi-r.1 for 107930858	cit-r.1 for 102616577	osa-u.5 for 9271691	osa-u.5 for 4328370	zma-u.5 for 103628194	zma-u.5 for 100383750	tae-r.2 for 123136410	hvu-r.1 for 123401050	sbi-r.1 for 8074661	bdi-r.1 for 100836034	bdi-r.1 for 100832711

Ortholog

Ortholog ID: 1999

Species

sot

sly

nta

ath

vvi

ppo

mtr

ghi

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102602559

uncharacterized LOC102595108

uncharacterized LOC102596878

vacuolar protein sorting-associated protein IST1

uncharacterized LOC107796377

uncharacterized LOC107814461

Regulator of Vps4 activity in the MVB pathway protein

uncharacterized LOC104880647

uncharacterized LOC100251435

uncharacterized LOC18107618

uncharacterized LOC7473036

IST1-like protein

uncharacterized LOC11432045

uncharacterized LOC25496909

uncharacterized LOC107949590

polycomb group protein FERTILIZATION-INDEPENDENT SEED 2

uncharacterized LOC107901225

uncharacterized LOC102616577

uncharacterized LOC9271691

uncharacterized LOC4328370

uncharacterized LOC103628194

uncharacterized LOC100383750

uncharacterized LOC123168835

uncharacterized LOC123401050

uncharacterized LOC8074661

uncharacterized LOC100836034

uncharacterized LOC100832711

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	4
sot04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2
ath00062	Fatty acid elongation	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	3
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	6
ghi00250	Alanine, aspartate and glutamate metabolism	6
ghi00910	Nitrogen metabolism	6
ghi01200	Carbon metabolism	6
ghi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	3
zma01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

102602559

102595108

102596878

101251365

107796377

107814461

844330

2745821

104880647

100251435

18107618

7473036

11409191

11432045

25496909

107949590

107933008

107901225

102616577

9271691

4328370

103628194

100383750

123168835

123401050

8074661

100836034

100832711

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102602559 (sot-r.1 coexpression data)

Top 50 enrichment test to 102602559 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	vvi	ppo	mtr	ghi	cit	osa	zma	tae	hvu	sbi	bdi	cre	bna	bra
Paralog	3	2	2	2	2	2	2	3	3	1	2	2	1	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102602559 (sot-r.1 coexpression data)

Top 50 enrichment test to 102602559 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**