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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102603168   protein SLOW GREEN 1, chloroplastic 
 sly-u.5   101245871   protein SLOW GREEN 1, chloroplastic 
 nta-r.1   107813268   protein SLOW GREEN 1, chloroplastic-like 
 nta-r.1   107768792   protein SLOW GREEN 1, chloroplastic-like 
 ath-u.5   AT3G18420   Protein prenylyltransferase superfamily protein 
 gma-u.5   100780000   protein SLOW GREEN 1, chloroplastic 
 gma-u.5   100808986   protein SLOW GREEN 1, chloroplastic 
 bra-r.6   103869563   protein SLOW GREEN 1, chloroplastic 
 vvi-u.5   100852583   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7471463   protein SLOW GREEN 1, chloroplastic 
 ppo-u.5   7459077   protein SLOW GREEN 1, chloroplastic 
 mtr-u.5   120577624   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107941247   protein SLOW GREEN 1, chloroplastic 
 ghi-r.1   107945917   protein SLOW GREEN 1, chloroplastic 
 cit-r.1   102617544   protein SLOW GREEN 1, chloroplastic 

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Top 50 coexpressed genes to 102603168 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102603168 (sot-r.1 coexpression data)

CoexMap"102603168"


sotLOC102603168 | Entrez gene ID : 102603168    
Species sot sly nta ath gma bra vvi ppo mtr ghi cit bdi osa tae bna zma cre sbi hvu
Paralog 1 1 2 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006348542.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_006348542.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006348542.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102603168
sly-u.5
for
101245871
nta-r.1
for
107813268
nta-r.1
for
107768792
ath-u.5
for
AT3G18420
gma-u.5
for
100780000
gma-u.5
for
100808986
bra-r.6
for
103869563
vvi-u.5
for
100852583
ppo-u.5
for
7471463
ppo-u.5
for
7459077
mtr-u.5
for
120577624
ghi-r.1
for
107941247
ghi-r.1
for
107945917
cit-r.1
for
102617544


Ortholog ID: 12898
Species sot sly nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi cit
Symbol LOC102603168 LOC101245871 LOC107813268 LOC107768792 AT3G18420 LOC100780000 LOC100808986 LOC103869563 LOC100852583 LOC7471463 LOC7459077 LOC120577624 LOC107941247 LOC107945917 LOC102617544
Function* protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic-like protein SLOW GREEN 1, chloroplastic-like Protein prenylyltransferase superfamily protein protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic protein SLOW GREEN 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00750 Vitamin B6 metabolism 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma03040 Spliceosome 3
gma03010 Ribosome 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00250 Alanine, aspartate and glutamate metabolism 4
bra01230 Biosynthesis of amino acids 4
bra00230 Purine metabolism 3
bra03010 Ribosome 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 3
vvi00230 Purine metabolism 2
vvi00010 Glycolysis / Gluconeogenesis 2
vvi01200 Carbon metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 6
ppo00030 Pentose phosphate pathway 3
ppo00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr01230 Biosynthesis of amino acids 3
mtr01200 Carbon metabolism 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 3
cit01230 Biosynthesis of amino acids 3
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102603168 101245871 107813268 107768792 821371 100780000 100808986 103869563 100852583 7471463 7459077 120577624 107941247 107945917 102617544
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