ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102603331	uncharacterized LOC102603331
sot-r.1	102602991	uncharacterized protein At5g01610-like
sot-r.1	102602653	uncharacterized LOC102602653
sot-r.1	102586733	uncharacterized LOC102586733
sly-u.5	101268718	uncharacterized protein At5g01610-like
sly-u.5	101259638	uncharacterized protein At5g01610-like
nta-r.1	107789513	uncharacterized protein At5g01610-like
nta-r.1	107784694	uncharacterized protein At5g01610-like
ath-u.5	AT4G02360	transmembrane protein, putative (Protein of unknown function, DUF538)
ath-u.5	AT4G02370	pectinesterase (Protein of unknown function, DUF538)
ath-u.5	AT1G02816	pectinesterase (Protein of unknown function, DUF538)
gma-u.5	100808207	uncharacterized protein At5g01610
gma-u.5	100804470	uncharacterized LOC100804470
gma-u.5	100802253	uncharacterized LOC100802253
bra-r.6	103868218	uncharacterized LOC103868218
bra-r.6	103858768	uncharacterized LOC103858768
bra-r.6	103844560	uncharacterized LOC103844560
vvi-u.5	109123816	uncharacterized LOC109123816
vvi-u.5	100263080	uncharacterized LOC100263080
ppo-u.5	7491292	uncharacterized protein At5g01610
ppo-u.5	7478935	uncharacterized LOC7478935
ppo-u.5	7491293	uncharacterized LOC7491293
mtr-u.5	11412469	uncharacterized LOC11412469
mtr-u.5	11416817	uncharacterized protein At5g01610
mtr-u.5	25499597	uncharacterized protein At5g01610
ghi-r.1	107899079	uncharacterized LOC107899079
ghi-r.1	107894139	uncharacterized LOC107894139
ghi-r.1	107912365	uncharacterized protein At5g01610
bna-r.1	BNAC02G28130D	uncharacterized BNAC02G28130D
bna-r.1	125601113	uncharacterized LOC125601113
bna-r.1	106365517	uncharacterized LOC106365517
cit-r.1	102611093	hypothetical protein
cit-r.1	102617838	uncharacterized LOC102617838
cit-r.1	107177241	uncharacterized protein At5g01610-like
osa-u.5	4338542	uncharacterized LOC4338542
osa-u.5	4338543	uncharacterized protein At5g01610
zma-u.5	100277114	uncharacterized LOC100277114
zma-u.5	100276626	DUF538 family protein
tae-r.2	123181771	uncharacterized LOC123181771
tae-r.2	123053275	uncharacterized LOC123053275
tae-r.2	123129535	uncharacterized LOC123129535
hvu-r.1	123440670	uncharacterized LOC123440670
sbi-r.1	8061920	uncharacterized LOC8061920
sbi-r.1	8061918	uncharacterized LOC8061918
bdi-r.1	100834310	uncharacterized LOC100834310

Top 50 coexpressed genes to 102603331 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102603331 (sot-r.1 coexpression data)

CoexMap"102603331"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015170072.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, chlo 2, vacu 2, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1

(predict for XP_015170072.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_015170072.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102603331	sot-r.1 for 102602991	sot-r.1 for 102602653	sot-r.1 for 102586733	sly-u.5 for 101268718	sly-u.5 for 101259638	nta-r.1 for 107789513	nta-r.1 for 107784694	ath-u.5 for AT4G02360	ath-u.5 for AT4G02370	ath-u.5 for AT1G02816	gma-u.5 for 100808207	gma-u.5 for 100804470	gma-u.5 for 100802253	bra-r.6 for 103868218	bra-r.6 for 103858768	bra-r.6 for 103844560	vvi-u.5 for 109123816	vvi-u.5 for 100263080	ppo-u.5 for 7491292	ppo-u.5 for 7478935	ppo-u.5 for 7491293	mtr-u.5 for 11412469	mtr-u.5 for 11416817	mtr-u.5 for 25499597	ghi-r.1 for 107899079	ghi-r.1 for 107894139	ghi-r.1 for 107912365	bna-r.1 for BNAC02G28130D	bna-r.1 for 125601113	bna-r.1 for 106365517	cit-r.1 for 102611093	cit-r.1 for 102617838	cit-r.1 for 107177241	osa-u.5 for 4338542	osa-u.5 for 4338543	zma-u.5 for 100277114	zma-u.5 for 100276626	tae-r.2 for 123181771	tae-r.2 for 123053275	tae-r.2 for 123129535	hvu-r.1 for 123440670	sbi-r.1 for 8061920	sbi-r.1 for 8061918	bdi-r.1 for 100834310

Ortholog

Ortholog ID: 1243

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102603331

uncharacterized LOC102602653

uncharacterized LOC102586733

uncharacterized protein At5g01610-like

uncharacterized LOC101244031

uncharacterized protein At5g01610-like

uncharacterized protein At5g01610

uncharacterized protein At5g01610-like

transmembrane protein, putative (Protein of unknown function, DUF538)

pectinesterase (Protein of unknown function, DUF538)

uncharacterized protein At5g01610

uncharacterized LOC100804470

uncharacterized LOC100527514

uncharacterized LOC103868218

uncharacterized LOC103858768

uncharacterized LOC103836754

uncharacterized LOC100252793

uncharacterized LOC7478935

uncharacterized LOC18098652

uncharacterized LOC7478846

uncharacterized LOC11412469

uncharacterized protein At5g01610

uncharacterized LOC121209349

uncharacterized protein At5g01610

uncharacterized LOC107925513

uncharacterized LOC106369294

uncharacterized LOC106438671

uncharacterized BNAC03G30980D

hypothetical protein

uncharacterized LOC102617838

uncharacterized protein At5g01610-like

uncharacterized LOC4338542

uncharacterized protein At5g01610

uncharacterized LOC100277114

DUF538 family protein

uncharacterized LOC123181771

uncharacterized LOC123053275

uncharacterized LOC123129535

uncharacterized LOC123440670

uncharacterized LOC8061920

uncharacterized LOC8061918

uncharacterized LOC100834310

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	6
sly00900	Terpenoid backbone biosynthesis	3
sly00280	Valine, leucine and isoleucine degradation	2
sly00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	8
nta00260	Glycine, serine and threonine metabolism	6
nta00010	Glycolysis / Gluconeogenesis	4
nta00020	Citrate cycle (TCA cycle)	4
nta00280	Valine, leucine and isoleucine degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04081	Hormone signaling	4
nta04082	Neuroactive ligand signaling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	3
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	5
gma00513	Various types of N-glycan biosynthesis	4
gma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	3
gma00513	Various types of N-glycan biosynthesis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04142	Lysosome	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	3
bra00010	Glycolysis / Gluconeogenesis	2
bra00030	Pentose phosphate pathway	2
bra00052	Galactose metabolism	2
bra00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	6
ppo04145	Phagosome	5
ppo04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	5
ppo04145	Phagosome	5
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00941	Flavonoid biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	7
mtr00909	Sesquiterpenoid and triterpenoid biosynthesis	4
mtr00999	Biosynthesis of various plant secondary metabolites	4
mtr00280	Valine, leucine and isoleucine degradation	3
mtr00650	Butanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00340	Histidine metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	3
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	2
osa00513	Various types of N-glycan biosynthesis	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa04145	Phagosome	3
osa00220	Arginine biosynthesis	3
osa01210	2-Oxocarboxylic acid metabolism	3
osa01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	8
hvu00020	Citrate cycle (TCA cycle)	2
hvu00190	Oxidative phosphorylation	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	8
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

102603331

102602653

102586733

101259638

101244031

101243740

107764662

107795716

827767

828057

839308

100808207

100804470

100527514

103868218

103858768

103836754

100252793

7478935

18098652

7478846

11412469

11416817

25499597

121209349

107925517

107925513

106369294

106438671

106435612

102611093

102617838

107177241

4338542

4338543

100277114

100276626

123181771

123053275

123129535

123440670

8061920

8061918

100834310

The preparation time of this page was 0.2 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	3	3	3	2	3	3	3	3	3	2	2	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102603331 (sot-r.1 coexpression data)

Top 50 enrichment test to 102603331 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**