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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600833   small nuclear ribonucleoprotein E-like 
 sot-r.1   102596544   small nuclear ribonucleoprotein E-like 
 sly-u.5   101258239   uncharacterized LOC101258239 
 sly-u.5   101247333   uncharacterized LOC101247333 
 nta-r.1   107810445   uncharacterized LOC107810445 
 nta-r.1   107806389   uncharacterized LOC107806389 
 nta-r.1   107779871   uncharacterized LOC107779871 
 ath-u.5   AT2G18740   Small nuclear ribonucleoprotein family protein 
 ath-u.5   AT4G30330   Small nuclear ribonucleoprotein family protein 
 gma-u.5   100816107   small nuclear ribonucleoprotein E 
 gma-u.5   100807929   small nuclear ribonucleoprotein E 
 gma-u.5   100500256   small nuclear ribonucleoprotein E 
 bra-r.6   103828371   small nuclear ribonucleoprotein E 
 bra-r.6   103874062   small nuclear ribonucleoprotein E 
 vvi-u.5   100257667   small nuclear ribonucleoprotein E-like 
 ppo-u.5   18100540   uncharacterized LOC18100540 
 ppo-u.5   18107772   uncharacterized LOC18107772 
 mtr-u.5   11427208   small nuclear ribonucleoprotein E 
 mtr-u.5   11406496   small nuclear ribonucleoprotein E 
 ghi-r.1   107928261   small nuclear ribonucleoprotein E 
 ghi-r.1   107909182   small nuclear ribonucleoprotein E 
 bna-r.1   106379109   small nuclear ribonucleoprotein E-like 
 bna-r.1   106357702   small nuclear ribonucleoprotein E 
 bna-r.1   106375940   small nuclear ribonucleoprotein E 
 cit-r.1   102619789   uncharacterized LOC102619789 
 cit-r.1   102623698   uncharacterized LOC102623698 
 osa-u.5   4328158   uncharacterized LOC4328158 
 osa-u.5   4344666   uncharacterized LOC4344666 
 zma-u.5   103649582   small nuclear ribonucleoprotein E-like 
 zma-u.5   100282045   small nuclear ribonucleoprotein E 
 tae-r.2   123147398   small nuclear ribonucleoprotein E 
 tae-r.2   123157702   small nuclear ribonucleoprotein E 
 tae-r.2   123143556   small nuclear ribonucleoprotein E 
 hvu-r.1   123407643   small nuclear ribonucleoprotein E-like 
 sbi-r.1   8079513   small nuclear ribonucleoprotein E 
 bdi-r.1   100836785   small nuclear ribonucleoprotein E 
 bdi-r.1   100821943   small nuclear ribonucleoprotein E 
 cre-r.1   CHLRE_08g385200v5   uncharacterized protein 

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Top 50 coexpressed genes to 102600833 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600833 (sot-r.1 coexpression data)

CoexMap"102606204"


sotLOC102606204 | Entrez gene ID : 102606204      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 3 2 3 2 1 2 2 2 3 2 2 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (151 genes)  IEA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (119 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006367615.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto_nucl 3  (predict for XP_006367615.1)
Subcellular
localization
TargetP
mito 5,  scret 3  (predict for XP_006367615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600833
sot-r.1
for
102596544
sly-u.5
for
101258239
sly-u.5
for
101247333
nta-r.1
for
107810445
nta-r.1
for
107806389
nta-r.1
for
107779871
ath-u.5
for
AT2G18740
ath-u.5
for
AT4G30330
gma-u.5
for
100816107
gma-u.5
for
100807929
gma-u.5
for
100500256
bra-r.6
for
103828371
bra-r.6
for
103874062
vvi-u.5
for
100257667
ppo-u.5
for
18100540
ppo-u.5
for
18107772
mtr-u.5
for
11427208
mtr-u.5
for
11406496
ghi-r.1
for
107928261
ghi-r.1
for
107909182
bna-r.1
for
106379109
bna-r.1
for
106357702
bna-r.1
for
106375940
cit-r.1
for
102619789
cit-r.1
for
102623698
osa-u.5
for
4328158
osa-u.5
for
4344666
zma-u.5
for
103649582
zma-u.5
for
100282045
tae-r.2
for
123147398
tae-r.2
for
123157702
tae-r.2
for
123143556
hvu-r.1
for
123407643
sbi-r.1
for
8079513
bdi-r.1
for
100836785
bdi-r.1
for
100821943
cre-r.1
for
CHLRE_08g385200v5


Ortholog ID: 4190
Species sot sot sly sly nta nta nta ath ath gma gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna bna cit cit osa osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC102600833 LOC102596544 LOC101258239 LOC101247333 LOC107810445 LOC107806389 LOC107779871 AT2G18740 AT4G30330 LOC100816107 LOC100500256 LOC100306304 LOC103828371 LOC103874062 LOC100257667 LOC18100540 LOC18107772 LOC11427208 LOC11406496 LOC107928261 LOC107909182 LOC106379109 LOC106375940 LOC106440841 LOC102619789 LOC102623698 LOC4328158 LOC4344666 LOC103649582 LOC100282045 LOC123147398 LOC123143556 LOC123132020 LOC123407643 LOC8079513 LOC100836785 LOC100821943 CHLRE_08g385200v5
Function* small nuclear ribonucleoprotein E-like small nuclear ribonucleoprotein E-like uncharacterized LOC101258239 uncharacterized LOC101247333 uncharacterized LOC107810445 uncharacterized LOC107806389 uncharacterized LOC107779871 Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E-like uncharacterized LOC18100540 uncharacterized LOC18107772 small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E-like small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E-like uncharacterized LOC102619789 uncharacterized LOC102623698 uncharacterized LOC4328158 uncharacterized LOC4344666 small nuclear ribonucleoprotein E-like small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E-like small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E small nuclear ribonucleoprotein E uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03010 Ribosome 6
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 3
nta04120 Ubiquitin mediated proteolysis 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
nta03250 Viral life cycle - HIV-1 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta03040 Spliceosome 7
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03010 Ribosome 4
ath03020 RNA polymerase 4
ath03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03010 Ribosome 6
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 7
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03018 RNA degradation 4
gma03010 Ribosome 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra04145 Phagosome 2
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03010 Ribosome 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 12
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 11
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
cit04122 Sulfur relay system 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 12
zma03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
zma03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03040 Spliceosome 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 7
sbi03010 Ribosome 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 9
bdi03010 Ribosome 3
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 13
cre03015 mRNA surveillance pathway 4
cre03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102600833 102596544 101258239 101247333 107810445 107806389 107779871 816389 829156 100816107 100500256 100306304 103828371 103874062 100257667 18100540 18107772 11427208 11406496 107928261 107909182 106379109 106375940 106440841 102619789 102623698 4328158 4344666 103649582 100282045 123147398 123143556 123132020 123407643 8079513 100836785 100821943 5719795
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