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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   109120124   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 nta-r.1   107813009   putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 
 nta-r.1   142166903   pentatricopeptide repeat-containing protein At3g50420-like 
 ath-u.5   AT1G23450   PPR superfamily protein 
 ghi-r.1   107886566   putative pentatricopeptide repeat-containing protein At5g09950 
 ghi-r.1   107909680   putative pentatricopeptide repeat-containing protein At3g05240 
 bna-r.1   106397327   pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like 
 cit-r.1   112498979   pentatricopeptide repeat-containing protein At4g33990 
 sbi-r.1   8065588   pentatricopeptide repeat-containing protein At1g74600, chloroplastic 

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Top 50 coexpressed genes to 109120124 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109120124 (sly-u.5 coexpression data)

CoexMap"102606213"


sotLOC102606213 | Entrez gene ID : 102606213    
Species sly nta ath ghi bna cit sbi sot bdi vvi osa tae ppo zma cre mtr hvu gma bra
Paralog 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006350274.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 2,  E.R. 1,  golg 1  (predict for XP_006350274.2)
Subcellular
localization
TargetP
other 5  (predict for XP_006350274.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
109120124
nta-r.1
for
107813009
nta-r.1
for
142166903
ath-u.5
for
AT1G23450
ghi-r.1
for
107886566
ghi-r.1
for
107909680
bna-r.1
for
106397327
cit-r.1
for
112498979
sbi-r.1
for
8065588


Ortholog ID: 12488
Species sly nta nta ath ghi ghi bna cit sbi
Symbol LOC109120124 LOC107813009 LOC142166903 AT1G23450 LOC107886566 LOC107909680 LOC106397327 LOC112498979 LOC8065588
Function* putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial pentatricopeptide repeat-containing protein At3g50420-like PPR superfamily protein putative pentatricopeptide repeat-containing protein At5g09950 putative pentatricopeptide repeat-containing protein At3g05240 pentatricopeptide repeat-containing protein At1g74600, chloroplastic-like pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At1g74600, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109120124 107813009 142166903 838953 107886566 107909680 106397327 112498979 8065588
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